DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
SPGSNSKVPEI
Uniprot ID:
P78347
Source protein:
General transcription factor II-I
Source gene:
GTF2I
Class:
DEG_COP1_1
Location:
674:684
E3 ligase:
COP1
DEGRON score:
0.9825
ASA_SCORE:
83.5545
COIL:
0.8942
CONS_SCORE:
0.7994
DSS_SCORE:
0.6919
HELIX:
0.0405
FCONS_SCORE:
1.0741
RIG_SCORE:
0.5684
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S668P
TCGA-AA-3715
COAD
TCGA
SPGSNSKVPEI
DEG_COP1_1
0.6111
p.E689Q
TCGA-ZF-AA51
BLCA
TCGA
SPGSNSKVPEI
DEG_COP1_1
0.1944
p.E668Q
DO219093
BLCA
ICGC
SPGSNSKVPEI
DEG_COP1_1
0.6111
p.V691I
DO228454
PRAD
ICGC
SPGSNSKVPEI
DEG_COP1_1
0.1389
p.T687A
ACH-000989
Colon/Colorectal Cancer
CCLE
SPGSNSKVPEI
DEG_COP1_1
0.6944
Drug responses associated with GTF2I mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SPGSNSKVPEI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P78347
General transcription factor II-I
DEG_COP1_1
674:684
SPGSNSKVPEI
COP1
0.9825
More...