DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
STEFTPRK
Uniprot ID:
Q9NZI6
Source protein:
Transcription factor CP2-like protein 1
Source gene:
TFCP2L1
Class:
DEG_SCF_SKP2-CKS1_1
Location:
173:180
E3 ligase:
SKP2,CSK1
DEGRON score:
0.6545
ASA_SCORE:
63.475
COIL:
0.5809
CONS_SCORE:
0.8606
DSS_SCORE:
0.3504
HELIX:
0.0567
FCONS_SCORE:
1.1588
RIG_SCORE:
0.7525
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G182E
TCGA-SH-A9CT
MESO
TCGA
STEFTPRK
DEG_SCF_SKP2-CKS1_1
0.2778
p.G183S
DO230343
COCA
ICGC
STEFTPRK
DEG_SCF_SKP2-CKS1_1
0.25
p.R190Q
DO233898
GACA
ICGC
STEFTPRK
DEG_SCF_SKP2-CKS1_1
0.0556
p.H181N
DO229022
LICA
ICGC
STEFTPRK
DEG_SCF_SKP2-CKS1_1
0.3056
p.G182R
DO231813
LINC
ICGC
STEFTPRK
DEG_SCF_SKP2-CKS1_1
0.2778
p.K180R
SIDM01951
Colorectal Carcinoma
GDSC
STEFTPRK
DEG_SCF_SKP2-CKS1_1
0.7237
p.P188H
SIDM00423
B-Cell Non-Hodgkin's Lymphoma
GDSC
STEFTPRK
DEG_SCF_SKP2-CKS1_1
0.1111
p.P188H
SU-DHL-8
NS
COSMIC
STEFTPRK
DEG_SCF_SKP2-CKS1_1
0.1111
p.G186E
SIDM00304
Ovarian Carcinoma
GDSC
STEFTPRK
DEG_SCF_SKP2-CKS1_1
0.1667
p.G186E
ACH-002146
Ovarian Cancer
CCLE
STEFTPRK
DEG_SCF_SKP2-CKS1_1
0.1667
p.G186E
JHOS-3
ovary
COSMIC
STEFTPRK
DEG_SCF_SKP2-CKS1_1
0.1667
Drug responses associated with TFCP2L1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of STEFTPRK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NZI6
Transcription factor CP2-like protein 1
DEG_SCF_SKP2-CKS1_1
173:180
STEFTPRK
SKP2,CSK1
0.6545
More...