DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SVELTPMK
Uniprot ID:
Q8IXS8
Source protein:
Protein FAM126B
Source gene:
FAM126B
Class:
DEG_SCF_SKP2-CKS1_1
Location:
419:426
E3 ligase:
SKP2,CSK1
DEGRON score:
0.9864
ASA_SCORE:
88.275
COIL:
0.7288
CONS_SCORE:
0.3654
DSS_SCORE:
0.4196
HELIX:
0.2051
FCONS_SCORE:
1.2083
RIG_SCORE:
0.7696
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L422V
TCGA-3L-AA1B
COAD
TCGA
SVELTPMK
DEG_SCF_SKP2-CKS1_1
0.5654
p.L422V
DO50089
COAD
ICGC
SVELTPMK
DEG_SCF_SKP2-CKS1_1
0.5654
p.E421Q
DO233110
GACA
ICGC
SVELTPMK
DEG_SCF_SKP2-CKS1_1
0.6744
p.P412T
DO229028
LICA
ICGC
SVELTPMK
DEG_SCF_SKP2-CKS1_1
0.1389
p.V420D
SIDM00017
Squamous Cell Lung Carcinoma
GDSC
SVELTPMK
DEG_SCF_SKP2-CKS1_1
0.6674
p.V420D
ACH-000912
Lung Cancer
CCLE
SVELTPMK
DEG_SCF_SKP2-CKS1_1
0.6674
Drug responses associated with FAM126B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SVELTPMK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IXS8
Protein FAM126B
DEG_SCF_SKP2-CKS1_1
419:426
SVELTPMK
SKP2,CSK1
0.9864
More...