DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TRAALPAVR
Uniprot ID:
Q9UD57
Source protein:
NK1 transcription factor-related protein 2
Source gene:
NKX1-2
Class:
DEG_APCC_DBOX_1
Location:
32:40
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5735
ASA_SCORE:
89.0444
COIL:
0.8278
CONS_SCORE:
0.1911
DSS_SCORE:
0.4533
HELIX:
0.138
FCONS_SCORE:
0.4226
RIG_SCORE:
0.7655
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R33C
ACH-000985
Colon/Colorectal Cancer
CCLE
TRAALPAVR
DEG_APCC_DBOX_1
0.8301
p.V39E
DO48889
PBCA
ICGC
TRAALPAVR
DEG_APCC_DBOX_1
0.7693
p.L36I
DO234441
ESAD
ICGC
TRAALPAVR
DEG_APCC_DBOX_1
0.7174
p.F31L
DO228978
LICA
ICGC
TRAALPAVR
DEG_APCC_DBOX_1
0.3056
p.Q29H
TCGA-A5-A2K5
UCEC
TCGA
TRAALPAVR
DEG_APCC_DBOX_1
0.25
p.Q29H
DO41379
UCEC
ICGC
TRAALPAVR
DEG_APCC_DBOX_1
0.25
p.D27H
DO229016
COCA
ICGC
TRAALPAVR
DEG_APCC_DBOX_1
0.1944
p.D24Y
TCGA-AP-A059
UCEC
TCGA
TRAALPAVR
DEG_APCC_DBOX_1
0.1111
p.D24Y
DO41361
UCEC
ICGC
TRAALPAVR
DEG_APCC_DBOX_1
0.1111
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Drug responses associated with NKX1-2 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of TRAALPAVR
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UD57
NK1 transcription factor-related protein 2
DEG_APCC_DBOX_1
32:40
TRAALPAVR
APC,CDC20,FZR1
0.5735
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