DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TRKSLLHVP
Uniprot ID:
Q63HM1
Source protein:
Kynurenine formamidase
Source gene:
AFMID
Class:
DEG_APCC_DBOX_1
Location:
59:67
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7923
ASA_SCORE:
73.0111
COIL:
0.7494
CONS_SCORE:
0.4639
DSS_SCORE:
0.3784
HELIX:
0.1058
FCONS_SCORE:
1.0062
RIG_SCORE:
0.7644
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G49R
TCGA-AX-A06F
UCEC
TCGA
TRKSLLHVP
DEG_APCC_DBOX_1
0.0556
p.Y68C
TCGA-KS-A41F
THCA
TCGA
TRKSLLHVP
DEG_APCC_DBOX_1
0.3056
p.Y68C
DO40423
THCA
ICGC
TRKSLLHVP
DEG_APCC_DBOX_1
0.3056
p.E55K
DO51933
BLCA
ICGC
TRKSLLHVP
DEG_APCC_DBOX_1
0.2222
p.I64L
DO225283
BRCA
ICGC
TRKSLLHVP
DEG_APCC_DBOX_1
0.7174
p.I64L
DO227940
BRCA
ICGC
TRKSLLHVP
DEG_APCC_DBOX_1
0.7174
p.V57L
DO229008
LICA
ICGC
TRKSLLHVP
DEG_APCC_DBOX_1
0.2778
p.T70M
DO45326
LUAD
ICGC
TRKSLLHVP
DEG_APCC_DBOX_1
0.25
p.S62R
DO50688
ORCA
ICGC
TRKSLLHVP
DEG_APCC_DBOX_1
0.6316
p.R54I
DO50076
UCEC
ICGC
TRKSLLHVP
DEG_APCC_DBOX_1
0.1944
p.R54I
DO52412
UCEC
ICGC
TRKSLLHVP
DEG_APCC_DBOX_1
0.1944
p.R54I
DO43755
UCEC
ICGC
TRKSLLHVP
DEG_APCC_DBOX_1
0.1944
p.E72K
SIDM00570
Gastric Carcinoma
GDSC
TRKSLLHVP
DEG_APCC_DBOX_1
0.1944
p.E72K
SIDM00530
Esophageal Carcinoma
GDSC
TRKSLLHVP
DEG_APCC_DBOX_1
0.1944
p.E72K
SIDM00282
Colorectal Carcinoma
GDSC
TRKSLLHVP
DEG_APCC_DBOX_1
0.1944
p.E72K
SIDM00687
Gastric Carcinoma
GDSC
TRKSLLHVP
DEG_APCC_DBOX_1
0.1944
p.E72K
SIDM00618
Hepatocellular Carcinoma
GDSC
TRKSLLHVP
DEG_APCC_DBOX_1
0.1944
p.E72K
SIDM00989
Bladder Carcinoma
GDSC
TRKSLLHVP
DEG_APCC_DBOX_1
0.1944
p.E72K
SIDM01727
Chronic Myelogenous Leukemia
GDSC
TRKSLLHVP
DEG_APCC_DBOX_1
0.1944
p.G71S
SIDM01051
Ovarian Carcinoma
GDSC
TRKSLLHVP
DEG_APCC_DBOX_1
0.2222
p.G71S
SIDM00867
Glioblastoma
GDSC
TRKSLLHVP
DEG_APCC_DBOX_1
0.2222
p.R57W
SIDM00621
Ewing's Sarcoma
GDSC
TRKSLLHVP
DEG_APCC_DBOX_1
0.2778
p.R57W
ACH-002113
Bone Cancer
CCLE
TRKSLLHVP
DEG_APCC_DBOX_1
0.2778
p.R57W
EW-13
bone
COSMIC
TRKSLLHVP
DEG_APCC_DBOX_1
0.2778
Drug responses associated with AFMID mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRKSLLHVP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q63HM1
Kynurenine formamidase
DEG_APCC_DBOX_1
59:67
TRKSLLHVP
APC,CDC20,FZR1
0.7923
More...