DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TRVDLKELG
Uniprot ID:
Q5T2W1
Source protein:
Na
Source gene:
PDZK1
Class:
DEG_APCC_DBOX_1
Location:
98:106
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.875
ASA_SCORE:
86.5889
COIL:
0.6293
CONS_SCORE:
0.6064
DSS_SCORE:
0.4084
HELIX:
0.3441
FCONS_SCORE:
1.2622
RIG_SCORE:
0.8256
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K97N
TCGA-B5-A1MR
UCEC
TCGA
TRVDLKELG
DEG_APCC_DBOX_1
0.3056
p.K97N
DO41758
UCEC
ICGC
TRVDLKELG
DEG_APCC_DBOX_1
0.3056
p.G106R
TCGA-BH-A6R9
BRCA
TCGA
TRVDLKELG
DEG_APCC_DBOX_1
0.6457
p.G106R
DO219611
BRCA
ICGC
TRVDLKELG
DEG_APCC_DBOX_1
0.6457
p.E93D
TCGA-EO-A3AY
UCEC
TCGA
TRVDLKELG
DEG_APCC_DBOX_1
0.1944
p.E93D
DO43202
UCEC
ICGC
TRVDLKELG
DEG_APCC_DBOX_1
0.1944
p.D88Y
ACH-000496
Lung Cancer
CCLE
TRVDLKELG
DEG_APCC_DBOX_1
0.0556
p.D88Y
NCI-H1792
lung
COSMIC
TRVDLKELG
DEG_APCC_DBOX_1
0.0556
p.G106A
ACH-000705
Lung Cancer
CCLE
TRVDLKELG
DEG_APCC_DBOX_1
0.6429
p.G106A
ACH-001113
Lung Cancer
CCLE
TRVDLKELG
DEG_APCC_DBOX_1
0.6429
p.G106A
LC-1-sq
lung
COSMIC
TRVDLKELG
DEG_APCC_DBOX_1
0.6429
p.R99Q
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
TRVDLKELG
DEG_APCC_DBOX_1
0.7329
Drug responses associated with PDZK1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRVDLKELG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5T2W1
Na
DEG_APCC_DBOX_1
98:106
TRVDLKELG
APC,CDC20,FZR1
0.875
More...