DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VAFTPEGE
Uniprot ID:
P11021
Source protein:
Endoplasmic reticulum chaperone BiP
Source gene:
HSPA5
Class:
DEG_SCF_FBW7_2
Location:
66:73
E3 ligase:
FBXW7
DEGRON score:
0.9327
ASA_SCORE:
45.7
COIL:
0.4134
CONS_SCORE:
0.6933
DSS_SCORE:
0.3743
HELIX:
0.006
FCONS_SCORE:
0.8398
RIG_SCORE:
0.7871
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E71K
TCGA-AC-A2B8
BRCA
TCGA
VAFTPEGE
DEG_SCF_FBW7_2
0.591
p.E71K
DO5884
BRCA
ICGC
VAFTPEGE
DEG_SCF_FBW7_2
0.591
p.P70T
TCGA-DD-A4NP
LIHC
TCGA
VAFTPEGE
DEG_SCF_FBW7_2
0.7031
p.P70T
DO44958
LIHC
ICGC
VAFTPEGE
DEG_SCF_FBW7_2
0.7031
p.G72V
TCGA-EE-A2GH
SKCM
TCGA
VAFTPEGE
DEG_SCF_FBW7_2
0.6421
p.G72V
DO37643
SKCM
ICGC
VAFTPEGE
DEG_SCF_FBW7_2
0.6421
p.T69P
ACH-000354
Pancreatic Cancer
CCLE
VAFTPEGE
DEG_SCF_FBW7_2
0.8142
p.T69P
CAPAN-1
pancreas
COSMIC
VAFTPEGE
DEG_SCF_FBW7_2
0.8142
p.A67T
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
VAFTPEGE
DEG_SCF_FBW7_2
0.6028
Drug responses associated with HSPA5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VAFTPEGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P11021
Endoplasmic reticulum chaperone BiP
DEG_SCF_FBW7_2
66:73
VAFTPEGE
FBXW7
0.9327
More...