DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VALHDD
Uniprot ID:
P02751
Source protein:
Fibronectin
Source gene:
FN1
Class:
LIG_APCC_ABBA_1
Location:
1794:1799
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.706
ASA_SCORE:
52.8
COIL:
0.3747
CONS_SCORE:
0.4368
DSS_SCORE:
0.4571
HELIX:
0.0032
FCONS_SCORE:
0.9041
RIG_SCORE:
0.7901
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H1797Y
TCGA-AP-A059
UCEC
TCGA
VALHDD
LIG_APCC_ABBA_1
0.6118
p.H1797Y
DO41361
UCEC
ICGC
VALHDD
LIG_APCC_ABBA_1
0.6118
p.Y1789H
TCGA-BT-A3PK
BLCA
TCGA
VALHDD
LIG_APCC_ABBA_1
0.1944
p.G1807R
TCGA-ER-A19H
SKCM
TCGA
VALHDD
LIG_APCC_ABBA_1
0.1111
p.G1807R
DO47299
SKCM
ICGC
VALHDD
LIG_APCC_ABBA_1
0.1111
p.E1801G
TCGA-F4-6704
COAD
TCGA
VALHDD
LIG_APCC_ABBA_1
0.2778
p.D1798N
TCGA-FI-A2D6
UCEC
TCGA
VALHDD
LIG_APCC_ABBA_1
0.5821
p.A1809T
DO219024
BLCA
ICGC
VALHDD
LIG_APCC_ABBA_1
0.0556
p.A1809T
DO51629
CESC
ICGC
VALHDD
LIG_APCC_ABBA_1
0.0556
p.A1809T
DO8192
COAD
ICGC
VALHDD
LIG_APCC_ABBA_1
0.0556
p.R1801Q
DO233941
GACA
ICGC
VALHDD
LIG_APCC_ABBA_1
0.2778
p.K1790N
DO13863
GBM
ICGC
VALHDD
LIG_APCC_ABBA_1
0.2222
p.V1792I
DO228264
LICA
ICGC
VALHDD
LIG_APCC_ABBA_1
0.2778
p.A1785T
DO47769
STAD
ICGC
VALHDD
LIG_APCC_ABBA_1
0.0833
p.Q1809H
DO229253
THCA
ICGC
VALHDD
LIG_APCC_ABBA_1
0.0556
p.Q1803R
SIDM01274
Esophageal Carcinoma
GDSC
VALHDD
LIG_APCC_ABBA_1
0.2222
p.H1797Q
SIDM00128
Head and Neck Carcinoma
GDSC
VALHDD
LIG_APCC_ABBA_1
0.7582
p.H1797Q
ACH-002249
Head and Neck Cancer
CCLE
VALHDD
LIG_APCC_ABBA_1
0.7582
p.H1797Q
JHU-011
upper_aerodigestive_tract
COSMIC
VALHDD
LIG_APCC_ABBA_1
0.7582
p.T1808I
SIDM01519
Head and Neck Carcinoma
GDSC
VALHDD
LIG_APCC_ABBA_1
0.0833
p.T1808I
ACH-000786
Lymphoma
CCLE
VALHDD
LIG_APCC_ABBA_1
0.0833
p.T1808I
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
VALHDD
LIG_APCC_ABBA_1
0.0833
p.V1807D
ACH-000920
Leukemia
CCLE
VALHDD
LIG_APCC_ABBA_1
0.1111
p.V1807D
CML-T1
haematopoietic_and_lymphoid_tissue
COSMIC
VALHDD
LIG_APCC_ABBA_1
0.1111
p.V1808D
CML-T1
haematopoietic_and_lymphoid_tissue
COSMIC
VALHDD
LIG_APCC_ABBA_1
0.0833
p.P1785A
RF-48
stomach
COSMIC
VALHDD
LIG_APCC_ABBA_1
0.0833
p.R1801W
SNU-81
large_intestine
COSMIC
VALHDD
LIG_APCC_ABBA_1
0.2778
Drug responses associated with FN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VALHDD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P02751
Fibronectin
LIG_APCC_ABBA_1
1794:1799
VALHDD
APC,CDC20,FZR1
0.706
More...