DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VARTPAGT
Uniprot ID:
P82912
Source protein:
28S ribosomal protein S11, mitochondrial
Source gene:
MRPS11
Class:
DEG_SCF_FBW7_1
Location:
25:32
E3 ligase:
FBXW7
DEGRON score:
0.9948
ASA_SCORE:
64.6
COIL:
0.7431
CONS_SCORE:
0.3019
DSS_SCORE:
0.3943
HELIX:
0.0801
FCONS_SCORE:
0.9868
RIG_SCORE:
0.7762
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q41P
TCGA-61-2012
OV
TCGA
VARTPAGT
DEG_SCF_FBW7_1
0.0833
p.Q41P
DO32536
OV
ICGC
VARTPAGT
DEG_SCF_FBW7_1
0.0833
p.R23W
TCGA-99-8032
LUAD
TCGA
VARTPAGT
DEG_SCF_FBW7_1
0.2778
p.R23W
DO23765
LUAD
ICGC
VARTPAGT
DEG_SCF_FBW7_1
0.2778
p.W17C
DO229038
LICA
ICGC
VARTPAGT
DEG_SCF_FBW7_1
0.1111
p.G22C
DO229041
LICA
ICGC
VARTPAGT
DEG_SCF_FBW7_1
0.25
p.Q39H
SIDM00789
Colorectal Carcinoma
GDSC
VARTPAGT
DEG_SCF_FBW7_1
0.1389
p.Q39H
ACH-000997
Colon/Colorectal Cancer
CCLE
VARTPAGT
DEG_SCF_FBW7_1
0.1389
p.Q39H
HCT-15
large_intestine
COSMIC
VARTPAGT
DEG_SCF_FBW7_1
0.1389
p.T16A
ACH-000961
Endometrial/Uterine Cancer
CCLE
VARTPAGT
DEG_SCF_FBW7_1
0.5278
Drug responses associated with MRPS11 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VARTPAGT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P82912
28S ribosomal protein S11, mitochondrial
DEG_SCF_FBW7_1
25:32
VARTPAGT
FBXW7
0.9948
More...