DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VAVFDD
Uniprot ID:
Q8TEY7
Source protein:
Ubiquitin carboxyl-terminal hydrolase 33
Source gene:
USP33
Class:
LIG_APCC_ABBA_1
Location:
163:168
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5245
ASA_SCORE:
82.1167
COIL:
0.6967
CONS_SCORE:
0.2627
DSS_SCORE:
0.304
HELIX:
0.2098
FCONS_SCORE:
0.8542
RIG_SCORE:
0.8855
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E176D
TCGA-96-8169
LUSC
TCGA
VAVFDD
LIG_APCC_ABBA_1
0.1111
p.V165I
TCGA-A5-A1OF
UCEC
TCGA
VAVFDD
LIG_APCC_ABBA_1
0.5965
p.V165I
TCGA-IB-7651
PAAD
TCGA
VAVFDD
LIG_APCC_ABBA_1
0.5965
p.N155D
TCGA-AA-3852
COAD
TCGA
VAVFDD
LIG_APCC_ABBA_1
0.1111
p.P161H
TCGA-B5-A1MX
UCEC
TCGA
VAVFDD
LIG_APCC_ABBA_1
0.2778
p.P176T
DO228900
LICA
ICGC
VAVFDD
LIG_APCC_ABBA_1
0.1111
p.P177H
DO228976
LICA
ICGC
VAVFDD
LIG_APCC_ABBA_1
0.0833
p.N166K
DO50859
LIRI
ICGC
VAVFDD
LIG_APCC_ABBA_1
0.6918
p.G160V
DO29378
OV
ICGC
VAVFDD
LIG_APCC_ABBA_1
0.25
Drug responses associated with USP33 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VAVFDD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TEY7
Ubiquitin carboxyl-terminal hydrolase 33
LIG_APCC_ABBA_1
163:168
VAVFDD
APC,CDC20,FZR1
0.5245
More...