DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VHLFKD
Uniprot ID:
O15266
Source protein:
Short stature homeobox protein
Source gene:
SHOX
Class:
LIG_APCC_ABBA_1
Location:
68:73
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5439
ASA_SCORE:
114.4667
COIL:
0.7537
CONS_SCORE:
0.3334
DSS_SCORE:
0.4443
HELIX:
0.2327
FCONS_SCORE:
0.8176
RIG_SCORE:
0.7919
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V68E
TCGA-05-5420
LUAD
TCGA
VHLFKD
LIG_APCC_ABBA_1
0.7693
p.V68E
DO26005
LUAD
ICGC
VHLFKD
LIG_APCC_ABBA_1
0.7693
p.D58H
TCGA-55-7815
LUAD
TCGA
VHLFKD
LIG_APCC_ABBA_1
0.0556
p.D58H
DO24537
LUAD
ICGC
VHLFKD
LIG_APCC_ABBA_1
0.0556
p.K72M
TCGA-55-8207
LUAD
TCGA
VHLFKD
LIG_APCC_ABBA_1
0.6951
p.K72M
DO45351
LUAD
ICGC
VHLFKD
LIG_APCC_ABBA_1
0.6951
p.H69N
TCGA-56-8305
LUSC
TCGA
VHLFKD
LIG_APCC_ABBA_1
0.6312
p.H69N
DO223725
LUSC
ICGC
VHLFKD
LIG_APCC_ABBA_1
0.6312
p.G63C
TCGA-78-7155
LUAD
TCGA
VHLFKD
LIG_APCC_ABBA_1
0.1944
p.G63C
DO23590
LUAD
ICGC
VHLFKD
LIG_APCC_ABBA_1
0.1944
p.H74R
TCGA-A6-5665
COAD
TCGA
VHLFKD
LIG_APCC_ABBA_1
0.3056
p.H74R
DO9756
COAD
ICGC
VHLFKD
LIG_APCC_ABBA_1
0.3056
p.G64S
TCGA-AG-3592
READ
TCGA
VHLFKD
LIG_APCC_ABBA_1
0.2222
p.G64S
DO37308
READ
ICGC
VHLFKD
LIG_APCC_ABBA_1
0.2222
p.P67Q
TCGA-AP-A0LE
UCEC
TCGA
VHLFKD
LIG_APCC_ABBA_1
0.3056
p.P67Q
DO43418
UCEC
ICGC
VHLFKD
LIG_APCC_ABBA_1
0.3056
p.V68A
TCGA-AX-A2HJ
UCEC
TCGA
VHLFKD
LIG_APCC_ABBA_1
0.6936
p.V68A
DO42105
UCEC
ICGC
VHLFKD
LIG_APCC_ABBA_1
0.6936
p.H69Q
TCGA-DA-A1HY
SKCM
TCGA
VHLFKD
LIG_APCC_ABBA_1
0.647
p.H69Q
DO37409
SKCM
ICGC
VHLFKD
LIG_APCC_ABBA_1
0.647
p.G64R
TCGA-E7-A519
BLCA
TCGA
VHLFKD
LIG_APCC_ABBA_1
0.2222
p.G64R
DO44028
BLCA
ICGC
VHLFKD
LIG_APCC_ABBA_1
0.2222
p.E80D
TCGA-EO-A22X
UCEC
TCGA
VHLFKD
LIG_APCC_ABBA_1
0.1389
p.E80D
DO43907
UCEC
ICGC
VHLFKD
LIG_APCC_ABBA_1
0.1389
p.H65L
TCGA-G9-6351
PRAD
TCGA
VHLFKD
LIG_APCC_ABBA_1
0.25
p.H65L
DO36325
PRAD
ICGC
VHLFKD
LIG_APCC_ABBA_1
0.25
p.D73Y
DO228986
LICA
ICGC
VHLFKD
LIG_APCC_ABBA_1
0.7325
p.V75I
SIDM01314
Colorectal Carcinoma
GDSC
VHLFKD
LIG_APCC_ABBA_1
0.2778
p.D76E
SIDM01413
Oral Cavity Carcinoma
GDSC
VHLFKD
LIG_APCC_ABBA_1
0.25
p.I59S
ACH-002287
Colon/Colorectal Cancer
CCLE
VHLFKD
LIG_APCC_ABBA_1
0.0833
Drug responses associated with SHOX mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VHLFKD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15266
Short stature homeobox protein
LIG_APCC_ABBA_1
68:73
VHLFKD
APC,CDC20,FZR1
0.5439
More...