DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VKENP
Uniprot ID:
Q9NQC7
Source protein:
Ubiquitin carboxyl-terminal hydrolase CYLD
Source gene:
CYLD
Class:
DEG_APCC_KENBOX_2
Location:
478:482
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7719
ASA_SCORE:
75.42
COIL:
0.6352
CONS_SCORE:
0.4916
DSS_SCORE:
0.2488
HELIX:
0.0088
FCONS_SCORE:
0.7765
RIG_SCORE:
0.7357
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P482L
TCGA-BF-A5EQ
SKCM
TCGA
VKENP
DEG_APCC_KENBOX_2
0.6471
p.P482L
DO219452
SKCM
ICGC
VKENP
DEG_APCC_KENBOX_2
0.6471
p.G492S
TCGA-BR-8078
STAD
TCGA
VKENP
DEG_APCC_KENBOX_2
0.0556
p.G492S
DO38288
STAD
ICGC
VKENP
DEG_APCC_KENBOX_2
0.0556
p.E471D
TCGA-CD-8529
STAD
TCGA
VKENP
DEG_APCC_KENBOX_2
0.1389
p.E471D
DO47753
STAD
ICGC
VKENP
DEG_APCC_KENBOX_2
0.1389
p.P483H
TCGA-DA-A1IB
SKCM
TCGA
VKENP
DEG_APCC_KENBOX_2
0.3056
p.P483H
DO38033
SKCM
ICGC
VKENP
DEG_APCC_KENBOX_2
0.3056
p.A476V
TCGA-DU-6392
LGG
TCGA
VKENP
DEG_APCC_KENBOX_2
0.2778
p.A476V
DO22237
LGG
ICGC
VKENP
DEG_APCC_KENBOX_2
0.2778
p.E471Q
TCGA-EA-A3HU
CESC
TCGA
VKENP
DEG_APCC_KENBOX_2
0.1389
p.E471Q
DO6320
CESC
ICGC
VKENP
DEG_APCC_KENBOX_2
0.1389
p.E480K
TCGA-EB-A4IS
SKCM
TCGA
VKENP
DEG_APCC_KENBOX_2
0.7022
p.E480K
DO47281
SKCM
ICGC
VKENP
DEG_APCC_KENBOX_2
0.7022
p.H468P
TCGA-EO-A22R
UCEC
TCGA
VKENP
DEG_APCC_KENBOX_2
0.0556
p.H468P
DO42713
UCEC
ICGC
VKENP
DEG_APCC_KENBOX_2
0.0556
p.L475V
DO233893
GACA
ICGC
VKENP
DEG_APCC_KENBOX_2
0.25
p.V472A
DO233865
GACA
ICGC
VKENP
DEG_APCC_KENBOX_2
0.1667
p.W490C
DO229045
LICA
ICGC
VKENP
DEG_APCC_KENBOX_2
0.1111
p.P483L
DO229479
SKCA
ICGC
VKENP
DEG_APCC_KENBOX_2
0.3056
Drug responses associated with CYLD mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKENP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NQC7
Ubiquitin carboxyl-terminal hydrolase CYLD
DEG_APCC_KENBOX_2
478:482
VKENP
APC,CDC20,FZR1
0.7719
More...