DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VKENW
Uniprot ID:
Q00059
Source protein:
Transcription factor A, mitochondrial
Source gene:
TFAM
Class:
DEG_APCC_KENBOX_2
Location:
185:189
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9153
ASA_SCORE:
51.98
COIL:
0.0326
CONS_SCORE:
0.3949
DSS_SCORE:
0.4887
HELIX:
0.9684
FCONS_SCORE:
1.0127
RIG_SCORE:
0.7823
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S185Y
DO13863
GBM
ICGC
VKENW
DEG_APCC_KENBOX_2
0.712
p.R195Q
DO229054
LICA
ICGC
VKENW
DEG_APCC_KENBOX_2
0.6111
p.R178C
DO220906
MELA
ICGC
VKENW
DEG_APCC_KENBOX_2
0.1389
p.R178H
DO35442
PACA
ICGC
VKENW
DEG_APCC_KENBOX_2
0.1389
p.D175N
DO37818
SKCM
ICGC
VKENW
DEG_APCC_KENBOX_2
0.0556
p.M190I
DO41903
UCEC
ICGC
VKENW
DEG_APCC_KENBOX_2
0.75
Drug responses associated with TFAM mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKENW
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q00059
Transcription factor A, mitochondrial
DEG_APCC_KENBOX_2
185:189
VKENW
APC,CDC20,FZR1
0.9153
More...