DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VKVHLE
Uniprot ID:
P07197
Source protein:
Neurofilament medium polypeptide
Source gene:
NEFM
Class:
LIG_APCC_ABBA_1
Location:
753:758
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9881
ASA_SCORE:
115.0667
COIL:
0.8453
CONS_SCORE:
0.7578
DSS_SCORE:
0.4833
HELIX:
0.1143
FCONS_SCORE:
1.0192
RIG_SCORE:
0.7903
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S752L
TCGA-BS-A0UV
UCEC
TCGA
VKVHLE
LIG_APCC_ABBA_1
0.3056
p.S752L
DO42793
UCEC
ICGC
VKVHLE
LIG_APCC_ABBA_1
0.3056
p.A744T
TCGA-EO-A22R
UCEC
TCGA
VKVHLE
LIG_APCC_ABBA_1
0.0833
p.A744T
DO42713
UCEC
ICGC
VKVHLE
LIG_APCC_ABBA_1
0.0833
p.V747F
DO228974
LICA
ICGC
VKVHLE
LIG_APCC_ABBA_1
0.1667
p.G752C
RKO
large_intestine
COSMIC
VKVHLE
LIG_APCC_ABBA_1
0.3056
Drug responses associated with NEFM mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKVHLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P07197
Neurofilament medium polypeptide
LIG_APCC_ABBA_1
753:758
VKVHLE
APC,CDC20,FZR1
0.9881
More...