DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VLIYMD
Uniprot ID:
P02786
Source protein:
Transferrin receptor protein 1
Source gene:
TFRC
Class:
LIG_APCC_ABBA_1
Location:
279:284
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6395
ASA_SCORE:
9.9333
COIL:
0.3795
CONS_SCORE:
0.5822
DSS_SCORE:
0.0275
HELIX:
0.0102
FCONS_SCORE:
1.2389
RIG_SCORE:
0.9549
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E294K
TCGA-BT-A20Q
BLCA
TCGA
VLIYMD
LIG_APCC_ABBA_1
0.0556
p.E294K
DO695
BLCA
ICGC
VLIYMD
LIG_APCC_ABBA_1
0.0556
p.Y282S
DO1203
BRCA
ICGC
VLIYMD
LIG_APCC_ABBA_1
0.8231
p.P289L
SIDM01483
Melanoma
GDSC
VLIYMD
LIG_APCC_ABBA_1
0.1944
p.P289L
ACH-000582
Skin Cancer
CCLE
VLIYMD
LIG_APCC_ABBA_1
0.1944
p.P289L
COLO-741
large_intestine
COSMIC
VLIYMD
LIG_APCC_ABBA_1
0.1944
Drug responses associated with TFRC mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLIYMD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P02786
Transferrin receptor protein 1
LIG_APCC_ABBA_1
279:284
VLIYMD
APC,CDC20,FZR1
0.6395
More...