DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPCAAVLPG
Uniprot ID:
Q86UC2
Source protein:
Radial spoke head protein 3 homolog
Source gene:
RSPH3
Class:
DEG_SIAH_1
Location:
35:43
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9611
ASA_SCORE:
56.8667
COIL:
0.706
CONS_SCORE:
0.3644
DSS_SCORE:
0.4793
HELIX:
0.0407
FCONS_SCORE:
0.9934
RIG_SCORE:
0.7113
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A38G
TCGA-78-7542
LUAD
TCGA
VPCAAVLPG
DEG_SIAH_1
0.754
p.A38G
DO24760
LUAD
ICGC
VPCAAVLPG
DEG_SIAH_1
0.754
p.G46E
TCGA-D9-A3Z1
SKCM
TCGA
VPCAAVLPG
DEG_SIAH_1
0.25
p.G46E
DO38105
SKCM
ICGC
VPCAAVLPG
DEG_SIAH_1
0.25
p.P36S
TCGA-EB-A4XL
SKCM
TCGA
VPCAAVLPG
DEG_SIAH_1
0.6752
p.P36S
TCGA-ER-A193
SKCM
TCGA
VPCAAVLPG
DEG_SIAH_1
0.6752
p.P36S
DO47401
SKCM
ICGC
VPCAAVLPG
DEG_SIAH_1
0.6752
p.P36S
DO47368
SKCM
ICGC
VPCAAVLPG
DEG_SIAH_1
0.6752
p.P36S
SIDM00140
Melanoma
GDSC
VPCAAVLPG
DEG_SIAH_1
0.6752
p.P36S
ACH-000968
Skin Cancer
CCLE
VPCAAVLPG
DEG_SIAH_1
0.6752
p.P36S
COLO-792
skin
COSMIC
VPCAAVLPG
DEG_SIAH_1
0.6752
p.P51Q
DO222830
BTCA
ICGC
VPCAAVLPG
DEG_SIAH_1
0.1111
p.G47E
DO20877
KIRP
ICGC
VPCAAVLPG
DEG_SIAH_1
0.2222
p.A26S
DO228942
LICA
ICGC
VPCAAVLPG
DEG_SIAH_1
0.0833
p.H45N
DO229026
LICA
ICGC
VPCAAVLPG
DEG_SIAH_1
0.2778
p.P42T
DO231844
LINC
ICGC
VPCAAVLPG
DEG_SIAH_1
0.7031
p.P39Q
DO27484
LUSC
ICGC
VPCAAVLPG
DEG_SIAH_1
0.7035
p.G47A
DO50657
ORCA
ICGC
VPCAAVLPG
DEG_SIAH_1
0.2222
p.E41G
DO232990
PEME
ICGC
VPCAAVLPG
DEG_SIAH_1
0.7199
p.C27W
DO50427
PRAD
ICGC
VPCAAVLPG
DEG_SIAH_1
0.1111
p.R48Q
SIDM00545
Melanoma
GDSC
VPCAAVLPG
DEG_SIAH_1
0.1944
p.R48Q
ACH-000987
Skin Cancer
CCLE
VPCAAVLPG
DEG_SIAH_1
0.1944
p.R48Q
Mewo
skin
COSMIC
VPCAAVLPG
DEG_SIAH_1
0.1944
p.M50V
ACH-000978
Endometrial/Uterine Cancer
CCLE
VPCAAVLPG
DEG_SIAH_1
0.1389
p.M50V
EN
endometrium
COSMIC
VPCAAVLPG
DEG_SIAH_1
0.1389
p.R31C
ACH-000994
Endometrial/Uterine Cancer
CCLE
VPCAAVLPG
DEG_SIAH_1
0.2222
Drug responses associated with RSPH3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPCAAVLPG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86UC2
Radial spoke head protein 3 homolog
DEG_SIAH_1
35:43
VPCAAVLPG
SIAH1,SIAH2,SIAH3
0.9611
More...