DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPVHFD
Uniprot ID:
P34096
Source protein:
Ribonuclease 4
Source gene:
RNASE4
Class:
LIG_APCC_ABBA_1
Location:
141:146
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8005
ASA_SCORE:
62.8833
COIL:
0.5462
CONS_SCORE:
0.6927
DSS_SCORE:
0.6641
HELIX:
0.0097
FCONS_SCORE:
1.0833
RIG_SCORE:
0.7798
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V131I
TCGA-AA-3672
COAD
TCGA
VPVHFD
LIG_APCC_ABBA_1
0.0556
p.V131I
DO9010
COAD
ICGC
VPVHFD
LIG_APCC_ABBA_1
0.0556
p.G137C
TCGA-EO-A3AZ
UCEC
TCGA
VPVHFD
LIG_APCC_ABBA_1
0.2222
p.G137C
DO50078
UCEC
ICGC
VPVHFD
LIG_APCC_ABBA_1
0.2222
p.G147D
TCGA-FR-A3YO
SKCM
TCGA
VPVHFD
LIG_APCC_ABBA_1
0.3056
p.G147D
DO37419
SKCM
ICGC
VPVHFD
LIG_APCC_ABBA_1
0.3056
Drug responses associated with RNASE4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPVHFD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P34096
Ribonuclease 4
LIG_APCC_ABBA_1
141:146
VPVHFD
APC,CDC20,FZR1
0.8005
More...