DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VRASLSDLS
Uniprot ID:
Q969K3
Source protein:
E3 ubiquitin-protein ligase RNF34
Source gene:
RNF34
Class:
DEG_APCC_DBOX_1
Location:
251:259
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9898
ASA_SCORE:
73.4778
COIL:
0.6089
CONS_SCORE:
0.6435
DSS_SCORE:
0.4368
HELIX:
0.2778
FCONS_SCORE:
1.0954
RIG_SCORE:
0.6947
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D258H
TCGA-AC-A23H
BRCA
TCGA
VRASLSDLS
DEG_APCC_DBOX_1
0.7688
p.D258H
DO2401
BRCA
ICGC
VRASLSDLS
DEG_APCC_DBOX_1
0.7688
p.D264N
SIDM00114
Non-Small Cell Lung Carcinoma
GDSC
VRASLSDLS
DEG_APCC_DBOX_1
0.1944
p.D264N
H513
pleura
COSMIC
VRASLSDLS
DEG_APCC_DBOX_1
0.1944
p.D263Y
SIDM00892
Breast Carcinoma
GDSC
VRASLSDLS
DEG_APCC_DBOX_1
0.2222
p.D263Y
BT-483
breast
COSMIC
VRASLSDLS
DEG_APCC_DBOX_1
0.2222
p.D262Y
ACH-000818
Breast Cancer
CCLE
VRASLSDLS
DEG_APCC_DBOX_1
0.25
p.D262Y
BT-483
breast
COSMIC
VRASLSDLS
DEG_APCC_DBOX_1
0.25
p.D263N
H513
pleura
COSMIC
VRASLSDLS
DEG_APCC_DBOX_1
0.2222
Drug responses associated with RNF34 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRASLSDLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q969K3
E3 ubiquitin-protein ligase RNF34
DEG_APCC_DBOX_1
251:259
VRASLSDLS
APC,CDC20,FZR1
0.9898
More...