DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VSLHED
Uniprot ID:
Q8NE31
Source protein:
Protein FAM13C
Source gene:
FAM13C
Class:
LIG_APCC_ABBA_1
Location:
27:32
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5285
ASA_SCORE:
93.2833
COIL:
0.7163
CONS_SCORE:
0.3178
DSS_SCORE:
0.4551
HELIX:
0.2515
FCONS_SCORE:
0.884
RIG_SCORE:
0.7328
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D25V
TCGA-43-2576
LUSC
TCGA
VSLHED
LIG_APCC_ABBA_1
0.2778
p.D25V
DO229050
LICA
ICGC
VSLHED
LIG_APCC_ABBA_1
0.2778
p.D25V
DO27005
LUSC
ICGC
VSLHED
LIG_APCC_ABBA_1
0.2778
p.E24Q
TCGA-50-5930
LUAD
TCGA
VSLHED
LIG_APCC_ABBA_1
0.25
p.E24Q
DO25189
LUAD
ICGC
VSLHED
LIG_APCC_ABBA_1
0.25
p.Q33K
TCGA-B5-A11E
UCEC
TCGA
VSLHED
LIG_APCC_ABBA_1
0.3056
p.Q33K
DO50976
LICA
ICGC
VSLHED
LIG_APCC_ABBA_1
0.3056
p.Q33K
DO41644
UCEC
ICGC
VSLHED
LIG_APCC_ABBA_1
0.3056
p.S28F
TCGA-D8-A1J8
BRCA
TCGA
VSLHED
LIG_APCC_ABBA_1
0.6871
p.S28F
DO1269
BRCA
ICGC
VSLHED
LIG_APCC_ABBA_1
0.6871
p.E24K
TCGA-E6-A1LX
UCEC
TCGA
VSLHED
LIG_APCC_ABBA_1
0.25
p.E24K
TCGA-FW-A3R5
SKCM
TCGA
VSLHED
LIG_APCC_ABBA_1
0.25
p.E24K
DO37406
SKCM
ICGC
VSLHED
LIG_APCC_ABBA_1
0.25
p.E24K
DO41020
UCEC
ICGC
VSLHED
LIG_APCC_ABBA_1
0.25
p.D41Y
TCGA-EO-A22X
UCEC
TCGA
VSLHED
LIG_APCC_ABBA_1
0.0833
p.D41Y
DO43907
UCEC
ICGC
VSLHED
LIG_APCC_ABBA_1
0.0833
p.T18I
TCGA-EO-A3KX
UCEC
TCGA
VSLHED
LIG_APCC_ABBA_1
0.0833
p.T18I
DO219774
UCEC
ICGC
VSLHED
LIG_APCC_ABBA_1
0.0833
p.D23E
DO48242
ESCA
ICGC
VSLHED
LIG_APCC_ABBA_1
0.2222
p.D35Y
SIDM01310
Esophageal Carcinoma
GDSC
VSLHED
LIG_APCC_ABBA_1
0.25
p.D35Y
SIDM01311
Esophageal Carcinoma
GDSC
VSLHED
LIG_APCC_ABBA_1
0.25
p.T20A
SIDM00832
Colorectal Carcinoma
GDSC
VSLHED
LIG_APCC_ABBA_1
0.1389
p.T20A
ACH-000680
Colon/Colorectal Cancer
CCLE
VSLHED
LIG_APCC_ABBA_1
0.1389
p.T20A
SW948
large_intestine
COSMIC
VSLHED
LIG_APCC_ABBA_1
0.1389
p.L39V
ACH-000868
Lung Cancer
CCLE
VSLHED
LIG_APCC_ABBA_1
0.1389
p.R40T
ECC10
stomach
COSMIC
VSLHED
LIG_APCC_ABBA_1
0.1111
Drug responses associated with FAM13C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSLHED
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NE31
Protein FAM13C
LIG_APCC_ABBA_1
27:32
VSLHED
APC,CDC20,FZR1
0.5285
More...