DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VSPHGD
Uniprot ID:
Q9Y6J9
Source protein:
TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
Source gene:
TAF6L
Class:
LIG_APCC_ABBA_1
Location:
494:499
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.997
ASA_SCORE:
81.8333
COIL:
0.9213
CONS_SCORE:
0.1853
DSS_SCORE:
0.776
HELIX:
0.0257
FCONS_SCORE:
1.0612
RIG_SCORE:
0.5882
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q487H
DO232224
PBCA
ICGC
VSPHGD
LIG_APCC_ABBA_1
0.1389
p.P486L
DO229227
THCA
ICGC
VSPHGD
LIG_APCC_ABBA_1
0.1111
p.D499H
SIDM00989
Bladder Carcinoma
GDSC
VSPHGD
LIG_APCC_ABBA_1
0.7688
p.D499H
ACH-000802
Bladder Cancer
CCLE
VSPHGD
LIG_APCC_ABBA_1
0.7688
p.G498A
ACH-000911
Gastric Cancer
CCLE
VSPHGD
LIG_APCC_ABBA_1
0.6429
Drug responses associated with TAF6L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSPHGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y6J9
TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
LIG_APCC_ABBA_1
494:499
VSPHGD
APC,CDC20,FZR1
0.997
More...