DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPGSE
Uniprot ID:
Q92538
Source protein:
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Source gene:
GBF1
Class:
DEG_SCF_FBW7_2
Location:
243:248
E3 ligase:
FBXW7
DEGRON score:
0.9269
ASA_SCORE:
86.0667
COIL:
0.947
CONS_SCORE:
0.1803
DSS_SCORE:
0.7832
HELIX:
0.0192
FCONS_SCORE:
0.8173
RIG_SCORE:
0.6044
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T256I
TCGA-24-1845
OV
TCGA
VTPGSE
DEG_SCF_FBW7_2
0.1111
p.T256I
DO29920
OV
ICGC
VTPGSE
DEG_SCF_FBW7_2
0.1111
p.M240I
TCGA-4G-AAZO
CHOL
TCGA
VTPGSE
DEG_SCF_FBW7_2
0.25
p.P236S
TCGA-DF-A2KV
UCEC
TCGA
VTPGSE
DEG_SCF_FBW7_2
0.1389
p.P236S
DO219771
UCEC
ICGC
VTPGSE
DEG_SCF_FBW7_2
0.1389
p.P236S
ACH-000973
Bladder Cancer
CCLE
VTPGSE
DEG_SCF_FBW7_2
0.1389
p.M240T
DO228947
LICA
ICGC
VTPGSE
DEG_SCF_FBW7_2
0.25
p.G246C
DO229027
LICA
ICGC
VTPGSE
DEG_SCF_FBW7_2
0.6489
p.G246V
DO229031
LICA
ICGC
VTPGSE
DEG_SCF_FBW7_2
0.6421
p.P237R
DO23170
LINC
ICGC
VTPGSE
DEG_SCF_FBW7_2
0.1667
p.S258L
SIDM01124
Non-Small Cell Lung Carcinoma
GDSC
VTPGSE
DEG_SCF_FBW7_2
0.0556
p.S258L
ACH-000945
Lung Cancer
CCLE
VTPGSE
DEG_SCF_FBW7_2
0.0556
p.S258L
NCI-H650
lung
COSMIC
VTPGSE
DEG_SCF_FBW7_2
0.0556
Drug responses associated with GBF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPGSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92538
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
DEG_SCF_FBW7_2
243:248
VTPGSE
FBXW7
0.9269
More...