DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPPGS
Uniprot ID:
Q12933
Source protein:
TNF receptor-associated factor 2
Source gene:
TRAF2
Class:
DEG_SCF_FBW7_1
Location:
6:11
E3 ligase:
FBXW7
DEGRON score:
0.7708
ASA_SCORE:
71.1833
COIL:
0.9237
CONS_SCORE:
0.323
DSS_SCORE:
0.4412
HELIX:
0.0583
FCONS_SCORE:
0.9928
RIG_SCORE:
0.6956
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V6A
DO222877
COCA
ICGC
VTPPGS
DEG_SCF_FBW7_1
0.6936
p.P9L
DO228581
GACA
ICGC
VTPPGS
DEG_SCF_FBW7_1
0.6471
p.V6M
SIDM00683
Prostate Carcinoma
GDSC
VTPPGS
DEG_SCF_FBW7_1
0.6097
p.V6M
ACH-000977
lymph_node
CCLE
VTPPGS
DEG_SCF_FBW7_1
0.6097
p.V6M
LNCaP-Clone-FGC
prostate
COSMIC
VTPPGS
DEG_SCF_FBW7_1
0.6097
p.P17S
SIDM00332
Breast Carcinoma
GDSC
VTPPGS
DEG_SCF_FBW7_1
0.1667
p.P17S
ACH-001819
Breast Cancer
CCLE
VTPPGS
DEG_SCF_FBW7_1
0.1667
p.P17S
MFM-223
breast
COSMIC
VTPPGS
DEG_SCF_FBW7_1
0.1667
Drug responses associated with TRAF2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPPGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12933
TNF receptor-associated factor 2
DEG_SCF_FBW7_1
6:11
VTPPGS
FBXW7
0.7708
More...