DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPVPT
Uniprot ID:
Q6PKG0
Source protein:
La-related protein 1
Source gene:
LARP1
Class:
DEG_SCF_FBW7_1
Location:
525:530
E3 ligase:
FBXW7
DEGRON score:
0.9995
ASA_SCORE:
80.6833
COIL:
0.949
CONS_SCORE:
0.3033
DSS_SCORE:
0.6385
HELIX:
0.0163
FCONS_SCORE:
1.077
RIG_SCORE:
0.6709
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E526D
TCGA-EY-A1GI
UCEC
TCGA
VTPVPT
DEG_SCF_FBW7_1
0.6758
p.E526D
DO41211
UCEC
ICGC
VTPVPT
DEG_SCF_FBW7_1
0.6758
p.E526Q
TCGA-JW-A852
CESC
TCGA
VTPVPT
DEG_SCF_FBW7_1
0.6744
p.E526Q
DO49978
CESC
ICGC
VTPVPT
DEG_SCF_FBW7_1
0.6744
p.M539T
TCGA-LN-A4A6
ESCA
TCGA
VTPVPT
DEG_SCF_FBW7_1
0.5278
p.E537K
DO48270
ESCA
ICGC
VTPVPT
DEG_SCF_FBW7_1
0.1389
p.D521Y
DO229038
LICA
ICGC
VTPVPT
DEG_SCF_FBW7_1
0.6667
p.D529Y
SIDM00971
Breast Carcinoma
GDSC
VTPVPT
DEG_SCF_FBW7_1
0.7325
p.D533Y
SIDM00017
Squamous Cell Lung Carcinoma
GDSC
VTPVPT
DEG_SCF_FBW7_1
0.25
p.D533Y
ACH-000912
Lung Cancer
CCLE
VTPVPT
DEG_SCF_FBW7_1
0.25
p.Q515E
ACH-001063
Ovarian Cancer
CCLE
VTPVPT
DEG_SCF_FBW7_1
0.5
Drug responses associated with LARP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPVPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6PKG0
La-related protein 1
DEG_SCF_FBW7_1
525:530
VTPVPT
FBXW7
0.9995
More...