DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VVLHED
Uniprot ID:
Q15029
Source protein:
116 kDa U5 small nuclear ribonucleoprotein component
Source gene:
EFTUD2
Class:
LIG_APCC_ABBA_1
Location:
57:62
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9936
ASA_SCORE:
70.8333
COIL:
0.4363
CONS_SCORE:
0.4655
DSS_SCORE:
0.6099
HELIX:
0.1147
FCONS_SCORE:
1.3652
RIG_SCORE:
0.7638
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D50N
TCGA-CM-6674
COAD
TCGA
VVLHED
LIG_APCC_ABBA_1
0.1389
p.D50N
DO10092
COAD
ICGC
VVLHED
LIG_APCC_ABBA_1
0.1389
p.H48Y
TCGA-DA-A1I8
SKCM
TCGA
VVLHED
LIG_APCC_ABBA_1
0.0833
p.H48Y
DO37424
SKCM
ICGC
VVLHED
LIG_APCC_ABBA_1
0.0833
p.E70K
TCGA-K7-A6G5
LIHC
TCGA
VVLHED
LIG_APCC_ABBA_1
0.1111
p.E70K
DO48602
LIHC
ICGC
VVLHED
LIG_APCC_ABBA_1
0.1111
p.D49N
SIDM01016
T-Lymphoblastic Leukemia
GDSC
VVLHED
LIG_APCC_ABBA_1
0.1111
p.D49N
SIDM01263
T-Lymphoblastic Leukemia
GDSC
VVLHED
LIG_APCC_ABBA_1
0.1111
p.D49N
ACH-000995
Leukemia
CCLE
VVLHED
LIG_APCC_ABBA_1
0.1111
p.K66T
SNU-81
large_intestine
COSMIC
VVLHED
LIG_APCC_ABBA_1
0.2222
Drug responses associated with EFTUD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVLHED
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15029
116 kDa U5 small nuclear ribonucleoprotein component
LIG_APCC_ABBA_1
57:62
VVLHED
APC,CDC20,FZR1
0.9936
More...