DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VYLHSE
Uniprot ID:
P98161
Source protein:
Polycystin-1
Source gene:
PKD1
Class:
LIG_APCC_ABBA_1
Location:
2944:2949
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6665
ASA_SCORE:
26.1167
COIL:
0.4762
CONS_SCORE:
0.3986
DSS_SCORE:
0.4657
HELIX:
0.0235
FCONS_SCORE:
1.3588
RIG_SCORE:
0.7444
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H2955Q
TCGA-60-2710
LUSC
TCGA
VYLHSE
LIG_APCC_ABBA_1
0.1667
p.H2955Q
DO26938
LUSC
ICGC
VYLHSE
LIG_APCC_ABBA_1
0.1667
p.V2944A
TCGA-AX-A2HJ
UCEC
TCGA
VYLHSE
LIG_APCC_ABBA_1
0.6936
p.V2944A
DO42105
UCEC
ICGC
VYLHSE
LIG_APCC_ABBA_1
0.6936
p.S2958L
SIDM00060
Ovarian Carcinoma
GDSC
VYLHSE
LIG_APCC_ABBA_1
0.0833
p.H2947N
SIDM00688
B-Cell Non-Hodgkin's Lymphoma
GDSC
VYLHSE
LIG_APCC_ABBA_1
0.7423
p.H2947N
ACH-002253
Lymphoma
CCLE
VYLHSE
LIG_APCC_ABBA_1
0.7423
p.H2947N
JSC-1
haematopoietic_and_lymphoid_tissue
COSMIC
VYLHSE
LIG_APCC_ABBA_1
0.7423
p.L2946P
SIDM01608
Endometrial Carcinoma
GDSC
VYLHSE
LIG_APCC_ABBA_1
0.6471
p.L2946P
ACH-000990
Endometrial/Uterine Cancer
CCLE
VYLHSE
LIG_APCC_ABBA_1
0.6471
p.P2938A
SIDM01774
Pancreatic Carcinoma
GDSC
VYLHSE
LIG_APCC_ABBA_1
0.1667
p.P2938A
ACH-000205
Pancreatic Cancer
CCLE
VYLHSE
LIG_APCC_ABBA_1
0.1667
Drug responses associated with PKD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VYLHSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P98161
Polycystin-1
LIG_APCC_ABBA_1
2944:2949
VYLHSE
APC,CDC20,FZR1
0.6665
More...