DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
YRKDLAKLH
Uniprot ID:
Q9UEU0
Source protein:
Vesicle transport through interaction with t-SNAREs homolog 1B
Source gene:
VTI1B
Class:
DEG_APCC_DBOX_1
Location:
84:92
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7596
ASA_SCORE:
74.7111
COIL:
0.0221
CONS_SCORE:
0.466
DSS_SCORE:
0.432
HELIX:
0.9774
FCONS_SCORE:
1.2603
RIG_SCORE:
0.7766
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R85L
TCGA-BQ-7044
KIRP
TCGA
YRKDLAKLH
DEG_APCC_DBOX_1
0.8428
p.R85L
DO20942
KIRP
ICGC
YRKDLAKLH
DEG_APCC_DBOX_1
0.8428
p.R82Q
TCGA-D1-A16X
UCEC
TCGA
YRKDLAKLH
DEG_APCC_DBOX_1
0.2778
p.R82Q
TCGA-D1-A17Q
UCEC
TCGA
YRKDLAKLH
DEG_APCC_DBOX_1
0.2778
p.R82Q
DO229253
THCA
ICGC
YRKDLAKLH
DEG_APCC_DBOX_1
0.2778
p.R82Q
DO41903
UCEC
ICGC
YRKDLAKLH
DEG_APCC_DBOX_1
0.2778
p.R82Q
DO41799
UCEC
ICGC
YRKDLAKLH
DEG_APCC_DBOX_1
0.2778
p.A102T
SIDM01007
T-Lymphoblastic Leukemia
GDSC
YRKDLAKLH
DEG_APCC_DBOX_1
0.0556
p.A102T
ACH-002256
Leukemia
CCLE
YRKDLAKLH
DEG_APCC_DBOX_1
0.0556
p.A102T
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
YRKDLAKLH
DEG_APCC_DBOX_1
0.0556
p.A89T
SIDM00674
Non-Cancerous
GDSC
YRKDLAKLH
DEG_APCC_DBOX_1
0.6028
p.A89T
SIDM00675
Breast Carcinoma
GDSC
YRKDLAKLH
DEG_APCC_DBOX_1
0.6028
Drug responses associated with VTI1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of YRKDLAKLH
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UEU0
Vesicle transport through interaction with t-SNAREs homolog 1B
DEG_APCC_DBOX_1
84:92
YRKDLAKLH
APC,CDC20,FZR1
0.7596
More...