DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
VSTM2B
UniProt ID:
A6NLU5
Entrez ID:
342865
Protein name:
V-set and transmembrane domain-containing protein 2B
External links:
UniprotKB
HGNC
RefSeq
COSMIC
Please click
HERE
for better display.
Functional annotation
Mutations
Degrons
Degron mutations
Network-rewiring
Drug response
Drug resistance
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GO - Biological processes (BP):
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GO - Molecular function (MF):
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GO - Cellular component (CC):
integral component of membrane [GO:0016021]...
integral component of membrane [GO:0016021]
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Choose a PDB ID:
Open in full screen with detailed sequence annotations
VSTM2B
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TCGA
ICGC
COSMIC
CCLE
GDSC
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Phosphorylation
Legend: PTM sites
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AAchange
Cancer
Sample
Mutation type
Dataset
Degron hit
Class
E3 ligase
Source protein
Location
Detail
Mutation
Sample
Cancer
Degron hit
Class
Location
Dataset
Mutation
Sample
Cancer
Dataset
Degron hit
Class
Location
Type
Impact score
p.R128H
TCGA-A6-6781
COAD
TCGA
HRLRLSAVR
DEG_APCC_DBOX_1
110:118
Mutation rewiring degron network
0.0556
p.R128H
DO8447
COAD
ICGC
HRLRLSAVR
DEG_APCC_DBOX_1
110:118
Mutation rewiring degron network
0.0556
p.R113Q
TCGA-AA-A022
COAD
TCGA
HRLRLSAVR
DEG_APCC_DBOX_1
110:118
Mutation altering degron motif
0.6218
p.R113Q
DO10647
COAD
ICGC
HRLRLSAVR
DEG_APCC_DBOX_1
110:118
Mutation altering degron motif
0.6218
p.R128C
TCGA-EA-A439
CESC
TCGA
HRLRLSAVR
DEG_APCC_DBOX_1
110:118
Mutation rewiring degron network
0.0556
p.R128C
DO44297
CESC
ICGC
HRLRLSAVR
DEG_APCC_DBOX_1
110:118
Mutation rewiring degron network
0.0556
p.G123A
DO233153
GACA
ICGC
HRLRLSAVR
DEG_APCC_DBOX_1
110:118
Mutation rewiring degron network
0.1944
p.R128L
DO228948
LICA
ICGC
HRLRLSAVR
DEG_APCC_DBOX_1
110:118
Mutation rewiring degron network
0.0556
p.R128L
DO229025
LICA
ICGC
HRLRLSAVR
DEG_APCC_DBOX_1
110:118
Mutation rewiring degron network
0.0556
p.V117L
DO229032
LICA
ICGC
HRLRLSAVR
DEG_APCC_DBOX_1
110:118
Mutation altering degron motif
0.5654
p.R113W
DO33004
PACA
ICGC
HRLRLSAVR
DEG_APCC_DBOX_1
110:118
Mutation altering degron motif
0.7523
p.R113W
SIDM00489
Oral Cavity Carcinoma
GDSC
HRLRLSAVR
DEG_APCC_DBOX_1
110:118
Mutation altering degron motif
0.7523
p.R113W
ACH-002043
Head and Neck Cancer
CCLE
HRLRLSAVR
DEG_APCC_DBOX_1
110:118
Mutation altering degron motif
0.7523
p.R113W
Ca9-22
upper aerodigestive tract
COSMIC
HRLRLSAVR
DEG_APCC_DBOX_1
110:118
Mutation altering degron motif
0.7523
p.E122V
SIDM01638
Non-Cancerous
GDSC
HRLRLSAVR
DEG_APCC_DBOX_1
110:118
Mutation rewiring degron network
0.2222
p.E122V
SIDM00172
Head and Neck Carcinoma
GDSC
HRLRLSAVR
DEG_APCC_DBOX_1
110:118
Mutation rewiring degron network
0.2222
p.V124M
SIDM00447
B-Lymphoblastic Leukemia
GDSC
HRLRLSAVR
DEG_APCC_DBOX_1
110:118
Mutation rewiring degron network
0.1667
p.V124M
ACH-000960
Leukemia
CCLE
HRLRLSAVR
DEG_APCC_DBOX_1
110:118
Mutation rewiring degron network
0.1667
p.V124M
REH
haematopoietic and lymphoid tissue
COSMIC
HRLRLSAVR
DEG_APCC_DBOX_1
110:118
Mutation rewiring degron network
0.1667
p.V124L
ACH-001863
Bile Duct Cancer
CCLE
HRLRLSAVR
DEG_APCC_DBOX_1
110:118
Mutation rewiring degron network
0.1667
Cell ID
Cell name
Cancer
Drug
IC50(uM)
Dataset
Protein
Degron
Cancer code
Cancer type
Drug
AVG_IC50(uM)(mutated)
AVG_IC50(uM)(Non-mutated)
Details
Kaplan plot for VSTM2B in
Select cancer type:
Download patient class data (Lower:Upper = 50%:50%)
*NOTE: the Kaplan plots were collected from
OncoLnc