DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
HRLRLSAVR
Uniprot ID:
A6NLU5
Source protein:
V-set and transmembrane domain-containing protein 2B
Source gene:
VSTM2B
Class:
DEG_APCC_DBOX_1
Location:
110:118
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6648
ASA_SCORE:
57.6667
COIL:
0.3941
CONS_SCORE:
0.8851
DSS_SCORE:
0.3104
HELIX:
0.0297
FCONS_SCORE:
0.937
RIG_SCORE:
0.8206
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R128H
TCGA-A6-6781
COAD
TCGA
HRLRLSAVR
DEG_APCC_DBOX_1
0.0556
p.R128H
DO8447
COAD
ICGC
HRLRLSAVR
DEG_APCC_DBOX_1
0.0556
p.R113Q
TCGA-AA-A022
COAD
TCGA
HRLRLSAVR
DEG_APCC_DBOX_1
0.6218
p.R113Q
DO10647
COAD
ICGC
HRLRLSAVR
DEG_APCC_DBOX_1
0.6218
p.R128C
TCGA-EA-A439
CESC
TCGA
HRLRLSAVR
DEG_APCC_DBOX_1
0.0556
p.R128C
DO44297
CESC
ICGC
HRLRLSAVR
DEG_APCC_DBOX_1
0.0556
p.G123A
DO233153
GACA
ICGC
HRLRLSAVR
DEG_APCC_DBOX_1
0.1944
p.R128L
DO228948
LICA
ICGC
HRLRLSAVR
DEG_APCC_DBOX_1
0.0556
p.R128L
DO229025
LICA
ICGC
HRLRLSAVR
DEG_APCC_DBOX_1
0.0556
p.V117L
DO229032
LICA
ICGC
HRLRLSAVR
DEG_APCC_DBOX_1
0.5654
p.R113W
DO33004
PACA
ICGC
HRLRLSAVR
DEG_APCC_DBOX_1
0.7523
p.R113W
SIDM00489
Oral Cavity Carcinoma
GDSC
HRLRLSAVR
DEG_APCC_DBOX_1
0.7523
p.R113W
ACH-002043
Head and Neck Cancer
CCLE
HRLRLSAVR
DEG_APCC_DBOX_1
0.7523
p.R113W
Ca9-22
upper_aerodigestive_tract
COSMIC
HRLRLSAVR
DEG_APCC_DBOX_1
0.7523
p.E122V
SIDM01638
Non-Cancerous
GDSC
HRLRLSAVR
DEG_APCC_DBOX_1
0.2222
p.E122V
SIDM00172
Head and Neck Carcinoma
GDSC
HRLRLSAVR
DEG_APCC_DBOX_1
0.2222
p.V124M
SIDM00447
B-Lymphoblastic Leukemia
GDSC
HRLRLSAVR
DEG_APCC_DBOX_1
0.1667
p.V124M
ACH-000960
Leukemia
CCLE
HRLRLSAVR
DEG_APCC_DBOX_1
0.1667
p.V124M
REH
haematopoietic_and_lymphoid_tissue
COSMIC
HRLRLSAVR
DEG_APCC_DBOX_1
0.1667
p.V124L
ACH-001863
Bile Duct Cancer
CCLE
HRLRLSAVR
DEG_APCC_DBOX_1
0.1667
Drug responses associated with VSTM2B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of HRLRLSAVR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NLU5
V-set and transmembrane domain-containing protein 2B
DEG_APCC_DBOX_1
110:118
HRLRLSAVR
APC,CDC20,FZR1
0.6648
More...