DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
CMSS1
UniProt ID:
Q9BQ75
Entrez ID:
84319
Protein name:
Protein CMSS1 (Cms1 ribosomal small subunit homolog)
External links:
UniprotKB
HGNC
RefSeq
COSMIC
Please click
HERE
for better display.
Functional annotation
Mutations
Degrons
Degron mutations
Network-rewiring
Drug response
Drug resistance
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GO - Biological processes (BP):
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GO - Molecular function (MF):
RNA binding [GO:0003723]...
RNA binding [GO:0003723]
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GO - Cellular component (CC):
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Choose a PDB ID:
Open in full screen with detailed sequence annotations
CMSS1
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TCGA
ICGC
COSMIC
CCLE
GDSC
Show Degron:
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AAchange
Cancer
Sample
Mutation type
Dataset
Degron hit
Class
E3 ligase
Source protein
Location
Detail
Mutation
Sample
Cancer
Degron hit
Class
Location
Dataset
Mutation
Sample
Cancer
Dataset
Degron hit
Class
Location
Type
Impact score
p.R71M
TCGA-44-8117
LUAD
TCGA
RKENT
DEG_APCC_KENBOX_2
63:67
Mutation rewiring degron network
0.2222
p.R71M
DO24028
LUAD
ICGC
RKENT
DEG_APCC_KENBOX_2
63:67
Mutation rewiring degron network
0.2222
p.T67N
TCGA-D1-A17Q
UCEC
TCGA
RKENT
DEG_APCC_KENBOX_2
63:67
Mutation altering degron motif
0.5944
p.T67N
DO41903
UCEC
ICGC
RKENT
DEG_APCC_KENBOX_2
63:67
Mutation altering degron motif
0.5944
p.E65K
TCGA-DS-A5RQ
CESC
TCGA
RKENT
DEG_APCC_KENBOX_2
63:67
Mutation altering degron motif
0.7022
p.E65K
DO44392
CESC
ICGC
RKENT
DEG_APCC_KENBOX_2
63:67
Mutation altering degron motif
0.7022
p.K61N
DO8858
COAD
ICGC
RKENT
DEG_APCC_KENBOX_2
63:67
Mutation blocking ubiquitination signal
0.7222
p.K77N
DO228672
LICA
ICGC
RKENT
DEG_APCC_KENBOX_2
63:67
Mutation blocking ubiquitination signal
0.5
p.Q59R
SIDM00789
Colorectal Carcinoma
GDSC
RKENT
DEG_APCC_KENBOX_2
63:67
Mutation rewiring degron network
0.2222
p.Q59R
ACH-000997
Colon/Colorectal Cancer
CCLE
RKENT
DEG_APCC_KENBOX_2
63:67
Mutation rewiring degron network
0.2222
p.Q59R
ACH-001061
Colon/Colorectal Cancer
CCLE
RKENT
DEG_APCC_KENBOX_2
63:67
Mutation rewiring degron network
0.2222
p.Q59R
HCT-15
large intestine
COSMIC
RKENT
DEG_APCC_KENBOX_2
63:67
Mutation rewiring degron network
0.2222
p.E68Q
EMC-BAC-2
lung
COSMIC
RKENT
DEG_APCC_KENBOX_2
63:67
Mutation rewiring degron network
0.3056
p.E68Q
SW982
soft tissue
COSMIC
RKENT
DEG_APCC_KENBOX_2
63:67
Mutation rewiring degron network
0.3056
Cell ID
Cell name
Cancer
Drug
IC50(uM)
Dataset
Protein
Degron
Cancer code
Cancer type
Drug
AVG_IC50(uM)(mutated)
AVG_IC50(uM)(Non-mutated)
Details
Kaplan plot for CMSS1 in
Select cancer type:
Download patient class data (Lower:Upper = 50%:50%)
*NOTE: the Kaplan plots were collected from
OncoLnc