DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RKENT
Uniprot ID:
Q9BQ75
Source protein:
Protein CMSS1
Source gene:
CMSS1
Class:
DEG_APCC_KENBOX_2
Location:
63:67
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6503
ASA_SCORE:
121.36
COIL:
0.7242
CONS_SCORE:
0.6231
DSS_SCORE:
0.6304
HELIX:
0.2764
FCONS_SCORE:
1.0199
RIG_SCORE:
0.6969
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R71M
TCGA-44-8117
LUAD
TCGA
RKENT
DEG_APCC_KENBOX_2
0.2222
p.R71M
DO24028
LUAD
ICGC
RKENT
DEG_APCC_KENBOX_2
0.2222
p.T67N
TCGA-D1-A17Q
UCEC
TCGA
RKENT
DEG_APCC_KENBOX_2
0.5944
p.T67N
DO41903
UCEC
ICGC
RKENT
DEG_APCC_KENBOX_2
0.5944
p.E65K
TCGA-DS-A5RQ
CESC
TCGA
RKENT
DEG_APCC_KENBOX_2
0.7022
p.E65K
DO44392
CESC
ICGC
RKENT
DEG_APCC_KENBOX_2
0.7022
p.K61N
DO8858
COAD
ICGC
RKENT
DEG_APCC_KENBOX_2
0.7222
p.K77N
DO228672
LICA
ICGC
RKENT
DEG_APCC_KENBOX_2
0.5
p.Q59R
SIDM00789
Colorectal Carcinoma
GDSC
RKENT
DEG_APCC_KENBOX_2
0.2222
p.Q59R
ACH-000997
Colon/Colorectal Cancer
CCLE
RKENT
DEG_APCC_KENBOX_2
0.2222
p.Q59R
ACH-001061
Colon/Colorectal Cancer
CCLE
RKENT
DEG_APCC_KENBOX_2
0.2222
p.Q59R
HCT-15
large_intestine
COSMIC
RKENT
DEG_APCC_KENBOX_2
0.2222
p.E68Q
EMC-BAC-2
lung
COSMIC
RKENT
DEG_APCC_KENBOX_2
0.3056
p.E68Q
SW982
soft_tissue
COSMIC
RKENT
DEG_APCC_KENBOX_2
0.3056
Drug responses associated with CMSS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RKENT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BQ75
Protein CMSS1
DEG_APCC_KENBOX_2
63:67
RKENT
APC,CDC20,FZR1
0.6503
More...