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mutLBSgeneDB |
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| Gene summary for GIMAP7 |
 Gene summary |
| Basic gene Info. | Gene symbol | GIMAP7 |
| Gene name | GTPase, IMAP family member 7 | |
| Synonyms | IAN7|hIAN7 | |
| Cytomap | UCSC genome browser: 7q36.1 | |
| Type of gene | protein-coding | |
| RefGenes | NM_153236.3, | |
| Description | GTPase IMAP family member 7IAN-7immune associated nucleotideimmune-associated nucleotide-binding protein 7immunity-associated nucleotide 7 protein | |
| Modification date | 20141207 | |
| dbXrefs | HGNC : HGNC | |
| Ensembl : ENSG00000179144 | ||
| HPRD : 17039 | ||
| Vega : OTTHUMG00000157626 | ||
| Protein | UniProt: Q8NHV1 go to UniProt's Cross Reference DB Table | |
| Expression | CleanEX: HS_GIMAP7 | |
| BioGPS: 168537 | ||
| Pathway | NCI Pathway Interaction Database: GIMAP7 | |
| KEGG: GIMAP7 | ||
| REACTOME: GIMAP7 | ||
| Pathway Commons: GIMAP7 | ||
| Context | iHOP: GIMAP7 | |
| ligand binding site mutation search in PubMed: GIMAP7 | ||
| UCL Cancer Institute: GIMAP7 | ||
| Assigned class in mutLBSgeneDB | C: This gene just belongs to mutLBSgenes. | |
| Gene ontology having evidence of Inferred from Direct Assay (IDA) from Entrez |
| GO ID | GO Term | PubMed ID | GO:0006184 | GTP catabolic process | 23454188 |
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| Ligand binding site mutations for GIMAP7 |
| Cancer type specific mutLBS sorted by frequency |
| LBS | AAchange of nsSNV | Cancer type | # samples | S36 | S36Y | COAD | 1 | R133 | R133H | COAD | 1 | F167 | A166T | COAD | 1 | R37 | R37K | SKCM | 1 | A42 | A42V | SKCM | 1 | A42 | Q41H | SKCM | 1 | S168 | S168N | UCEC | 1 |
| cf) Cancer type abbreviation. BLCA: Bladder urothelial carcinoma, BRCA: Breast invasive carcinoma, CESC: Cervical squamous cell carcinoma and endocervical adenocarcinoma, COAD: Colon adenocarcinoma, GBM: Glioblastoma multiforme, LGG: Brain lower grade glioma, HNSC: Head and neck squamous cell carcinoma, KICH: Kidney chromophobe, KIRC: Kidney renal clear cell carcinoma, KIRP: Kidney renal papillary cell carcinoma, LAML: Acute myeloid leukemia, LUAD: Lung adenocarcinoma, LUSC: Lung squamous cell carcinoma, OV: Ovarian serous cystadenocarcinoma, PAAD: Pancreatic adenocarcinoma, PRAD: Prostate adenocarcinoma, SKCM: Skin cutaneous melanoma, STAD: Stomach adenocarcinoma, THCA: Thyroid carcinoma, UCEC: Uterine corpus endometrial carcinoma. |
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| Protein structure related information for GIMAP7 |
| Relative protein structure stability change (ΔΔE) using Mupro 1.1 Mupro score denotes assessment of the effect of mutations on thermodynamic stability. (ΔΔE<0: mutation decreases stability, ΔΔE>0: mutation increases stability) |
 : nsSNV at non-LBS : nsSNV at LBS |
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| nsSNVs sorted by the relative stability change of protein structure by each mutation Blue: mutations of positive stability change. and red : the most recurrent mutation for this gene. |
| LBS | AAchange of nsSNV | Relative stability change | R133 | R133H | -1.1107739 | R37 | R37K | -0.93582614 | S168 | S168N | -0.64288107 | A42 | Q41H | -0.6283779 | F167 | A166T | -0.49914487 | S36 | S36Y | -0.31705114 | A42 | A42V | -0.26683802 |
| (MuPro1.1: Jianlin Cheng et al., Prediction of Protein Stability Changes for Single-Site Mutations Using Support Vector Machines, PROTEINS: Structure, Function, and Bioinformatics. 2006, 62:1125-1132) |
| Structure image for GIMAP7 from PDB |
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| Differential gene expression and gene-gene network for GIMAP7 |
| Differential gene expression between mutated and non-mutated LBS samples in all 16 major cancer types |
| Differential co-expressed gene network based on protein-protein interaction data (CePIN) |
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| Phenotype information for GIMAP7 |
| Gene level disease information (DisGeNet) |
| Disease ID | Disease name | # PubMed | Association type |
| Mutation level pathogenic information (ClinVar annotation) |
| Allele ID | AA change | Clinical significance | Origin | Phenotype IDs |
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| Pharmacological information for GIMAP7 |
| Drug information targeting mutLBSgene (Approved drugs only) |
| Drug status | DrugBank ID | Name | Type | Drug structure |
| Gene-centered ligand-gene interaction network |
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| Ligands binding to mutated ligand binding site of GIMAP7 go to BioLip |
| Ligand ID | Ligand short name | Ligand long name | PDB ID | PDB name | mutLBS | GNP | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 3zjc | B | S36 R37 A42 R133 F167 S168 | GNP | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 3zjc | F | S36 R37 A42 R133 F167 S168 | GNP | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 3zjc | E | S36 R37 R133 | GNP | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 3zjc | D | S36 R37 R133 F167 | GNP | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 3zjc | A | S36 R37 R133 F167 S168 | GNP | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 3zjc | C | S36 R37 R133 F167 S168 |
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| Conservation information for LBS of GIMAP7 |
| Multiple alignments for Q8NHV1 in multiple species |
| LBS | AA sequence | # species | Species |
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