mutLBSgeneDB |
Gene summary for FCN2 |
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Basic gene Info. | Gene symbol | FCN2 |
Gene name | ficolin (collagen/fibrinogen domain containing lectin) 2 | |
Synonyms | EBP-37|FCNL|P35|ficolin-2 | |
Cytomap | UCSC genome browser: 9q34.3 | |
Type of gene | protein-coding | |
RefGenes | NM_004108.2, NM_015837.2,NM_015838.1,NM_015839.1, | |
Description | 37 kDa elastin-binding proteinL-ficolincollagen/fibrinogen domain-containing protein 2ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)ficolin Bficolin-2ficolin-Bficolin-betaserum lectin p35 | |
Modification date | 20141207 | |
dbXrefs | MIM : 601624 | |
HGNC : HGNC | ||
Ensembl : ENSG00000160339 | ||
HPRD : 03376 | ||
Vega : OTTHUMG00000020892 | ||
Protein | UniProt: Q15485 go to UniProt's Cross Reference DB Table | |
Expression | CleanEX: HS_FCN2 | |
BioGPS: 2220 | ||
Pathway | NCI Pathway Interaction Database: FCN2 | |
KEGG: FCN2 | ||
REACTOME: FCN2 | ||
Pathway Commons: FCN2 | ||
Context | iHOP: FCN2 | |
ligand binding site mutation search in PubMed: FCN2 | ||
UCL Cancer Institute: FCN2 | ||
Assigned class in mutLBSgeneDB | C: This gene just belongs to mutLBSgenes. |
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GO ID | GO Term | PubMed ID |
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Ligand binding site mutations for FCN2 |
![]() We represented ligand binding site mutations only. (You can see big image via clicking.) ![]() |
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LBS | AAchange of nsSNV | Cancer type | # samples | G139 | G139R | SKCM | 2 | D194 | D194Y | COAD | 1 | F261 | M260T | COAD | 1 | R147 | Q146H | LUAD | 1 | D194 | R192L | LUAD | 1 | F287 | A288G | LUAD | 1 | E215 | E217K | SKCM | 1 | F287 | G285S | SKCM | 1 | N256 | C257F | STAD | 1 | E215 | A216V | STAD | 1 | L132 | T130N | UCEC | 1 |
cf) Cancer type abbreviation. BLCA: Bladder urothelial carcinoma, BRCA: Breast invasive carcinoma, CESC: Cervical squamous cell carcinoma and endocervical adenocarcinoma, COAD: Colon adenocarcinoma, GBM: Glioblastoma multiforme, LGG: Brain lower grade glioma, HNSC: Head and neck squamous cell carcinoma, KICH: Kidney chromophobe, KIRC: Kidney renal clear cell carcinoma, KIRP: Kidney renal papillary cell carcinoma, LAML: Acute myeloid leukemia, LUAD: Lung adenocarcinoma, LUSC: Lung squamous cell carcinoma, OV: Ovarian serous cystadenocarcinoma, PAAD: Pancreatic adenocarcinoma, PRAD: Prostate adenocarcinoma, SKCM: Skin cutaneous melanoma, STAD: Stomach adenocarcinoma, THCA: Thyroid carcinoma, UCEC: Uterine corpus endometrial carcinoma. |
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Protein structure related information for FCN2 |
![]() Mupro score denotes assessment of the effect of mutations on thermodynamic stability. (ΔΔE<0: mutation decreases stability, ΔΔE>0: mutation increases stability) |
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![]() Blue: mutations of positive stability change. and red : the most recurrent mutation for this gene. |
LBS | AAchange of nsSNV | Relative stability change | F287 | A288G | -1.6030686 | E215 | E217K | -1.1269433 | D194 | D194Y | -0.90246231 | L132 | T130N | -0.87304099 | R147 | Q146H | -0.79335223 | G139 | G139R | -0.79100796 | F261 | M260T | -0.7336814 | E215 | A216V | -0.5770472 | F287 | G285S | -0.5623178 | D194 | R192L | -0.29555225 | N256 | C257F | -0.25918426 |
(MuPro1.1: Jianlin Cheng et al., Prediction of Protein Stability Changes for Single-Site Mutations Using Support Vector Machines, PROTEINS: Structure, Function, and Bioinformatics. 2006, 62:1125-1132) |
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PDB ID | PDB title | PDB structure | 2J3G | L-FICOLIN | ![]() |
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Differential gene expression and gene-gene network for FCN2 |
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Phenotype information for FCN2 |
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Disease ID | Disease name | # PubMed | Association type |
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Allele ID | AA change | Clinical significance | Origin | Phenotype IDs |
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Pharmacological information for FCN2 |
![]() Heatmap showing the correlation between gene expression and drug response across all the cell-lines. We chose the top 20 among 138 drugs.We used Pearson's correlation coefficient. |
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Drug status | DrugBank ID | Name | Type | Drug structure |
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Ligand ID | Ligand short name | Ligand long name | PDB ID | PDB name | mutLBS |
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Conservation information for LBS of FCN2 |
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LBS | AA sequence | # species | Species |
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