mutLBSgeneDB |
Gene summary for ZBTB21 |
Gene summary |
Basic gene Info. | Gene symbol | ZBTB21 |
Gene name | zinc finger and BTB domain containing 21 | |
Synonyms | ZNF295 | |
Cytomap | UCSC genome browser: 21q22.3 | |
Type of gene | protein-coding | |
RefGenes | NM_001098402.1, NM_001098403.1,NM_020727.4, | |
Description | zinc finger and BTB domain-containing protein 21zinc finger protein 295 | |
Modification date | 20141207 | |
dbXrefs | HGNC : HGNC | |
Ensembl : ENSG00000173276 | ||
HPRD : 10328 | ||
Vega : OTTHUMG00000086789 | ||
Protein | UniProt: Q9ULJ3 go to UniProt's Cross Reference DB Table | |
Expression | CleanEX: HS_ZBTB21 | |
BioGPS: 49854 | ||
Pathway | NCI Pathway Interaction Database: ZBTB21 | |
KEGG: ZBTB21 | ||
REACTOME: ZBTB21 | ||
Pathway Commons: ZBTB21 | ||
Context | iHOP: ZBTB21 | |
ligand binding site mutation search in PubMed: ZBTB21 | ||
UCL Cancer Institute: ZBTB21 | ||
Assigned class in mutLBSgeneDB | C: This gene just belongs to mutLBSgenes. |
Gene ontology having evidence of Inferred from Direct Assay (IDA) from Entrez |
GO ID | GO Term | PubMed ID | GO:0045892 | negative regulation of transcription, DNA-templated | 15629158 |
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Ligand binding site mutations for ZBTB21 |
Cancer type specific mutLBS sorted by frequency |
LBS | AAchange of nsSNV | Cancer type | # samples | C780 | R782H | COAD | 2 | C724 | Y722C | LUAD | 1 | C780 | E779D | LUSC | 1 | C777 | L778R | LUSC | 1 | C777 | T776A | STAD | 1 | H793 | R792W | UCEC | 1 |
cf) Cancer type abbreviation. BLCA: Bladder urothelial carcinoma, BRCA: Breast invasive carcinoma, CESC: Cervical squamous cell carcinoma and endocervical adenocarcinoma, COAD: Colon adenocarcinoma, GBM: Glioblastoma multiforme, LGG: Brain lower grade glioma, HNSC: Head and neck squamous cell carcinoma, KICH: Kidney chromophobe, KIRC: Kidney renal clear cell carcinoma, KIRP: Kidney renal papillary cell carcinoma, LAML: Acute myeloid leukemia, LUAD: Lung adenocarcinoma, LUSC: Lung squamous cell carcinoma, OV: Ovarian serous cystadenocarcinoma, PAAD: Pancreatic adenocarcinoma, PRAD: Prostate adenocarcinoma, SKCM: Skin cutaneous melanoma, STAD: Stomach adenocarcinoma, THCA: Thyroid carcinoma, UCEC: Uterine corpus endometrial carcinoma. |
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Protein structure related information for ZBTB21 |
Relative protein structure stability change (ΔΔE) using Mupro 1.1 Mupro score denotes assessment of the effect of mutations on thermodynamic stability. (ΔΔE<0: mutation decreases stability, ΔΔE>0: mutation increases stability) |
: nsSNV at non-LBS: nsSNV at LBS |
nsSNVs sorted by the relative stability change of protein structure by each mutation Blue: mutations of positive stability change. and red : the most recurrent mutation for this gene. |
LBS | AAchange of nsSNV | Relative stability change | C777 | L778R | -1.147919 | H793 | R792W | -1.1280434 | C780 | E779D | -0.96202722 | C780 | R782H | -0.90586754 | C777 | T776A | -0.7927707 | C724 | Y722C | -0.60902475 |
(MuPro1.1: Jianlin Cheng et al., Prediction of Protein Stability Changes for Single-Site Mutations Using Support Vector Machines, PROTEINS: Structure, Function, and Bioinformatics. 2006, 62:1125-1132) |
Structure image for ZBTB21 from PDB |
PDB ID | PDB title | PDB structure | 1WJP | Solution structure of zf-C2H2 domains from human Zinc finger protein 295 |
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Differential gene expression and gene-gene network for ZBTB21 |
Differential gene expression between mutated and non-mutated LBS samples in all 16 major cancer types |
Differential co-expressed gene network based on protein-protein interaction data (CePIN) |
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Phenotype information for ZBTB21 |
Gene level disease information (DisGeNet) |
Disease ID | Disease name | # PubMed | Association type |
Mutation level pathogenic information (ClinVar annotation) |
Allele ID | AA change | Clinical significance | Origin | Phenotype IDs |
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Pharmacological information for ZBTB21 |
Drug information targeting mutLBSgene (Approved drugs only) |
Drug status | DrugBank ID | Name | Type | Drug structure |
Gene-centered ligand-gene interaction network |
Ligands binding to mutated ligand binding site of ZBTB21 go to BioLip |
Ligand ID | Ligand short name | Ligand long name | PDB ID | PDB name | mutLBS |
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Conservation information for LBS of ZBTB21 |
Multiple alignments for Q9ULJ3 in multiple species |
LBS | AA sequence | # species | Species |
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