mutLBSgeneDB

mutLBSgeneDB
mutated Ligand Binding Site gene DataBase

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory

Gene Summary

Ligand Binding Site Mutation Information

Protein Structure Related Information

Gene Expression and Gene-Gene Network

Phenotype Information

Pharmacological Information

Conservation Information for LBS

Gene summary for ENAH
Gene summary
Basic gene Info.Gene symbolENAH
Gene nameenabled homolog (Drosophila)
SynonymsENA|MENA|NDPP1
CytomapUCSC genome browser: 1q42.12
Type of geneprotein-coding
RefGenesNM_001008493.1,
NM_018212.4,
Descriptionmammalian enabled variant 11amammalian enabled variant panprotein enabled homolog
Modification date20141222
dbXrefs MIM : 609061
HGNC : HGNC
Ensembl : ENSG00000154380
HPRD : 12360
Vega : OTTHUMG00000037742
ProteinUniProt: Q8N8S7
go to UniProt's Cross Reference DB Table
ExpressionCleanEX: HS_ENAH
BioGPS: 55740
PathwayNCI Pathway Interaction Database: ENAH
KEGG: ENAH
REACTOME: ENAH
Pathway Commons: ENAH
ContextiHOP: ENAH
ligand binding site mutation search in PubMed: ENAH
UCL Cancer Institute: ENAH
Assigned class in mutLBSgeneDBC: This gene just belongs to mutLBSgenes.

Gene ontology having evidence of Inferred from Direct Assay (IDA) from Entrez
GO IDGO TermPubMed ID


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Ligand binding site mutations for ENAH
Lollipop-style diagram of mutations at LBS in amino-acid sequence.
We represented ligand binding site mutations only. (You can see big image via clicking.)
 
: non-synonymous mutation on LBS, Circle size denotes number of samples.

Cancer type specific mutLBS sorted by frequency
LBSAAchange of nsSNVCancer type# samples
V86G88DSKCM1
R81R81QUCEC1
cf) Cancer type abbreviation. BLCA: Bladder urothelial carcinoma, BRCA: Breast invasive carcinoma, CESC: Cervical squamous cell carcinoma and endocervical adenocarcinoma, COAD: Colon adenocarcinoma, GBM: Glioblastoma multiforme, LGG: Brain lower grade glioma, HNSC: Head and neck squamous cell carcinoma, KICH: Kidney chromophobe, KIRC: Kidney renal clear cell carcinoma, KIRP: Kidney renal papillary cell carcinoma, LAML: Acute myeloid leukemia, LUAD: Lung adenocarcinoma, LUSC: Lung squamous cell carcinoma, OV: Ovarian serous cystadenocarcinoma, PAAD: Pancreatic adenocarcinoma, PRAD: Prostate adenocarcinoma, SKCM: Skin cutaneous melanoma, STAD: Stomach adenocarcinoma, THCA: Thyroid carcinoma, UCEC: Uterine corpus endometrial carcinoma.


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Protein structure related information for ENAH
Relative protein structure stability change (ΔΔE) using Mupro 1.1
Mupro score denotes assessment of the effect of mutations on thermodynamic stability.
  (ΔΔE<0: mutation decreases stability, ΔΔE>0: mutation increases stability)
: nsSNV at non-LBS: nsSNV at LBS

nsSNVs sorted by the relative stability change of protein structure by each mutation
Blue: mutations of positive stability change. and red : the most recurrent mutation for this gene.
LBSAAchange of nsSNVRelative stability change
R81R81Q-1.1432904
V86G88D-1.062737
(MuPro1.1: Jianlin Cheng et al., Prediction of Protein Stability Changes for Single-Site Mutations Using Support Vector Machines, PROTEINS: Structure, Function, and Bioinformatics. 2006, 62:1125-1132)

Structure image for ENAH from PDB

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Differential gene expression and gene-gene network for ENAH
Differential gene expression between mutated and non-mutated LBS samples in all 16 major cancer types

Differential co-expressed gene network based on protein-protein interaction data (CePIN)
* Left PPI network was created from samples with mutations in the LBS of ENAH and the right PPI network was created from samples without mutations in the LBS of ENAH. Only genes with p-value < 0.05 are shown.
Red circle: input gene. Orange circle: LBSgene. Blue circle: other gene.


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Phenotype information for ENAH
Gene level disease information (DisGeNet)
Disease IDDisease name# PubMedAssociation type
umls:C0017661Glomerulonephritis, IGA2Biomarker, GeneticVariation

Mutation level pathogenic information (ClinVar annotation)
Allele IDAA changeClinical significanceOriginPhenotype IDs

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Pharmacological information for ENAH
Gene expression profile of anticancer drug treated cell-lines (CCLE)
Heatmap showing the correlation between gene expression and drug response across all the cell-lines. We chose the top 20 among 138 drugs.We used Pearson's correlation coefficient.
Drug information targeting mutLBSgene (Approved drugs only)
Drug statusDrugBank IDNameTypeDrug structure

Gene-centered ligand-gene interaction network

Ligands binding to mutated ligand binding site of ENAH go to BioLip
Ligand IDLigand short nameLigand long namePDB IDPDB namemutLBS
3VH(3AR,5AS,8S,10AS)-1-[(3S,6R,8AS)-1'-[(2S)-2-ACETAMIDO- 3-(2-CHLOROPHENYL)PROPANOYL]-5-OXIDANYLIDENE-SPIRO[1, 2,3,8A-TETRAHYDROINDOLIZINE-6,2'-PYRROLIDINE]-3- YL]CARBONYL-10-OXIDANYLIDENE-2,3,3A,5A,8,10A- HEXAHYDRODIPYRROLO[3,2-B:3',1'-F]AZEPINE-8-CARBOXYL4my6AR81 V86
3VH(3AR,5AS,8S,10AS)-1-[(3S,6R,8AS)-1'-[(2S)-2-ACETAMIDO- 3-(2-CHLOROPHENYL)PROPANOYL]-5-OXIDANYLIDENE-SPIRO[1, 2,3,8A-TETRAHYDROINDOLIZINE-6,2'-PYRROLIDINE]-3- YL]CARBONYL-10-OXIDANYLIDENE-2,3,3A,5A,8,10A- HEXAHYDRODIPYRROLO[3,2-B:3',1'-F]AZEPINE-8-CARBOXYL4my6BR81 V86


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Conservation information for LBS of ENAH
Multiple alignments for Q8N8S7 in multiple species
LBSAA sequence# speciesSpecies


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