mutLBSgeneDB |
Gene summary for GORASP1 |
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Basic gene Info. | Gene symbol | GORASP1 |
Gene name | golgi reassembly stacking protein 1, 65kDa | |
Synonyms | GOLPH5|GRASP65|P65 | |
Cytomap | UCSC genome browser: 3p22-p21.33 | |
Type of gene | protein-coding | |
RefGenes | NM_001278789.1, NM_001278790.1,NM_031899.3,NR_103866.1,NR_103867.1, | |
Description | Golgi peripheral membrane protein p65Golgi phosphoprotein 5Golgi reassembly and stacking protein 1Golgi reassembly-stacking protein 1golgi reassembly-stacking protein of 65 kDa | |
Modification date | 20141207 | |
dbXrefs | MIM : 606867 | |
HGNC : HGNC | ||
Ensembl : ENSG00000114745 | ||
HPRD : 06038 | ||
Vega : OTTHUMG00000131292 | ||
Protein | UniProt: Q9BQQ3 go to UniProt's Cross Reference DB Table | |
Expression | CleanEX: HS_GORASP1 | |
BioGPS: 64689 | ||
Pathway | NCI Pathway Interaction Database: GORASP1 | |
KEGG: GORASP1 | ||
REACTOME: GORASP1 | ||
Pathway Commons: GORASP1 | ||
Context | iHOP: GORASP1 | |
ligand binding site mutation search in PubMed: GORASP1 | ||
UCL Cancer Institute: GORASP1 | ||
Assigned class in mutLBSgeneDB | C: This gene just belongs to mutLBSgenes. |
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GO ID | GO Term | PubMed ID |
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Ligand binding site mutations for GORASP1 |
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LBS | AAchange of nsSNV | Cancer type | # samples | A108 | R106S | COAD | 2 | V100 | V100A | COAD | 1 | L152 | F150S | COAD | 1 | A108 | R106C | OV | 1 | E147 | F149Y | UCEC | 1 | E147 | F149V | UCEC | 1 | A108 | R106C | UCEC | 1 |
cf) Cancer type abbreviation. BLCA: Bladder urothelial carcinoma, BRCA: Breast invasive carcinoma, CESC: Cervical squamous cell carcinoma and endocervical adenocarcinoma, COAD: Colon adenocarcinoma, GBM: Glioblastoma multiforme, LGG: Brain lower grade glioma, HNSC: Head and neck squamous cell carcinoma, KICH: Kidney chromophobe, KIRC: Kidney renal clear cell carcinoma, KIRP: Kidney renal papillary cell carcinoma, LAML: Acute myeloid leukemia, LUAD: Lung adenocarcinoma, LUSC: Lung squamous cell carcinoma, OV: Ovarian serous cystadenocarcinoma, PAAD: Pancreatic adenocarcinoma, PRAD: Prostate adenocarcinoma, SKCM: Skin cutaneous melanoma, STAD: Stomach adenocarcinoma, THCA: Thyroid carcinoma, UCEC: Uterine corpus endometrial carcinoma. |
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Protein structure related information for GORASP1 |
![]() Mupro score denotes assessment of the effect of mutations on thermodynamic stability. (ΔΔE<0: mutation decreases stability, ΔΔE>0: mutation increases stability) |
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![]() Blue: mutations of positive stability change. and red : the most recurrent mutation for this gene. |
LBS | AAchange of nsSNV | Relative stability change | A108 | R106S | -1.4849115 | A108 | R106C | -1.2280195 | L152 | F150S | -1.1114371 | E147 | F149V | -0.77207944 | E147 | F149Y | -0.74157835 | V100 | V100A | -0.6621243 |
(MuPro1.1: Jianlin Cheng et al., Prediction of Protein Stability Changes for Single-Site Mutations Using Support Vector Machines, PROTEINS: Structure, Function, and Bioinformatics. 2006, 62:1125-1132) |
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PDB ID | PDB title | PDB structure | PDB not available for this protein | ![]() |
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Differential gene expression and gene-gene network for GORASP1 |
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Phenotype information for GORASP1 |
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Disease ID | Disease name | # PubMed | Association type |
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Allele ID | AA change | Clinical significance | Origin | Phenotype IDs |
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Pharmacological information for GORASP1 |
![]() Heatmap showing the correlation between gene expression and drug response across all the cell-lines. We chose the top 20 among 138 drugs.We used Pearson's correlation coefficient. |
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Drug status | DrugBank ID | Name | Type | Drug structure |
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Ligand ID | Ligand short name | Ligand long name | PDB ID | PDB name | mutLBS | III | Peptide ligand (SER,ASN,PRO,CYS,ILE,PRO,PHE,PHE,TYR,ARG,ALA,ASP,GLU,ASN,ASP,GLU,VAL,LYS,ILE,THR,VAL,ILE) | 4rey | A | V100 A108 E147 L152 |
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Conservation information for LBS of GORASP1 |
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LBS | AA sequence | # species | Species |
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