mutLBSgeneDB

mutLBSgeneDB
mutated Ligand Binding Site gene DataBase

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Gene Summary

Ligand Binding Site Mutation Information

Protein Structure Related Information

Gene Expression and Gene-Gene Network

Phenotype Information

Pharmacological Information

Conservation Information for LBS

Gene summary for SULT1A2
Gene summary
Basic gene Info.Gene symbolSULT1A2
Gene namesulfotransferase family, cytosolic, 1A, phenol-preferring, member 2
SynonymsHAST4|P-PST|ST1A2|STP2|TSPST2
CytomapUCSC genome browser: 16p12.1
Type of geneprotein-coding
RefGenesNM_001054.3,
NM_177528.2,
DescriptionP-PST 2aryl sulfotransferase 2arylamine sulfotransferasephenol sulfotransferase 2phenol-preferring phenol sulfotransferase2phenol-sulfating phenol sulfotransferase 2phenolic-metabolizing (P) form of PSTsulfotransferase 1A2thermostable phenol sulfo
Modification date20141207
dbXrefs MIM : 601292
HGNC : HGNC
Ensembl : ENSG00000197165
HPRD : 03187
Vega : OTTHUMG00000048082
ProteinUniProt: P50226
go to UniProt's Cross Reference DB Table
ExpressionCleanEX: HS_SULT1A2
BioGPS: 6799
PathwayNCI Pathway Interaction Database: SULT1A2
KEGG: SULT1A2
REACTOME: SULT1A2
Pathway Commons: SULT1A2
ContextiHOP: SULT1A2
ligand binding site mutation search in PubMed: SULT1A2
UCL Cancer Institute: SULT1A2
Assigned class in mutLBSgeneDBC: This gene just belongs to mutLBSgenes.

Gene ontology having evidence of Inferred from Direct Assay (IDA) from Entrez
GO IDGO TermPubMed ID
GO:0006805xenobiotic metabolic process20417180
GO:0018958phenol-containing compound metabolic process20417180
GO:0051923sulfation20056724


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Ligand binding site mutations for SULT1A2

Cancer type specific mutLBS sorted by frequency
LBSAAchange of nsSNVCancer type# samples
K106H108QLUAD1
cf) Cancer type abbreviation. BLCA: Bladder urothelial carcinoma, BRCA: Breast invasive carcinoma, CESC: Cervical squamous cell carcinoma and endocervical adenocarcinoma, COAD: Colon adenocarcinoma, GBM: Glioblastoma multiforme, LGG: Brain lower grade glioma, HNSC: Head and neck squamous cell carcinoma, KICH: Kidney chromophobe, KIRC: Kidney renal clear cell carcinoma, KIRP: Kidney renal papillary cell carcinoma, LAML: Acute myeloid leukemia, LUAD: Lung adenocarcinoma, LUSC: Lung squamous cell carcinoma, OV: Ovarian serous cystadenocarcinoma, PAAD: Pancreatic adenocarcinoma, PRAD: Prostate adenocarcinoma, SKCM: Skin cutaneous melanoma, STAD: Stomach adenocarcinoma, THCA: Thyroid carcinoma, UCEC: Uterine corpus endometrial carcinoma.


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Protein structure related information for SULT1A2
Relative protein structure stability change (ΔΔE) using Mupro 1.1
Mupro score denotes assessment of the effect of mutations on thermodynamic stability.
  (ΔΔE<0: mutation decreases stability, ΔΔE>0: mutation increases stability)
: nsSNV at non-LBS: nsSNV at LBS

nsSNVs sorted by the relative stability change of protein structure by each mutation
Blue: mutations of positive stability change. and red : the most recurrent mutation for this gene.
LBSAAchange of nsSNVRelative stability change
K106H108Q-0.62208562
(MuPro1.1: Jianlin Cheng et al., Prediction of Protein Stability Changes for Single-Site Mutations Using Support Vector Machines, PROTEINS: Structure, Function, and Bioinformatics. 2006, 62:1125-1132)

Structure image for SULT1A2 from PDB

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Differential gene expression and gene-gene network for SULT1A2
Differential gene expression between mutated and non-mutated LBS samples in all 16 major cancer types

Differential co-expressed gene network based on protein-protein interaction data (CePIN)
* Left PPI network was created from samples with mutations in the LBS of SULT1A2 and the right PPI network was created from samples without mutations in the LBS of SULT1A2. Only genes with p-value < 0.05 are shown.
Red circle: input gene. Orange circle: LBSgene. Blue circle: other gene.


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Phenotype information for SULT1A2
Gene level disease information (DisGeNet)
Disease IDDisease name# PubMedAssociation type
umls:C0008625Chromosome Aberrations1Biomarker

Mutation level pathogenic information (ClinVar annotation)
Allele IDAA changeClinical significanceOriginPhenotype IDs

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Pharmacological information for SULT1A2
Gene expression profile of anticancer drug treated cell-lines (CCLE)
Heatmap showing the correlation between gene expression and drug response across all the cell-lines. We chose the top 20 among 138 drugs.We used Pearson's correlation coefficient.
Drug information targeting mutLBSgene (Approved drugs only)
Drug statusDrugBank IDNameTypeDrug structure

Gene-centered ligand-gene interaction network

Ligands binding to mutated ligand binding site of SULT1A2 go to BioLip
Ligand IDLigand short nameLigand long namePDB IDPDB namemutLBS
CACALCIUM(2+)1z29AK106


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Conservation information for LBS of SULT1A2
Multiple alignments for P50226 in multiple species
LBSAA sequence# speciesSpecies


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