mutLBSgeneDB |
Gene summary for CDC7 |
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Basic gene Info. | Gene symbol | CDC7 |
Gene name | cell division cycle 7 | |
Synonyms | CDC7L1|HsCDC7|Hsk1|huCDC7 | |
Cytomap | UCSC genome browser: 1p22 | |
Type of gene | protein-coding | |
RefGenes | NM_001134419.1, NM_001134420.1,NM_003503.3, | |
Description | CDC7 (cell division cycle 7, S. cerevisiae, homolog)-like 1CDC7-related kinasecell division cycle 7 homologcell division cycle 7-like protein 1cell division cycle 7-related protein kinase | |
Modification date | 20141207 | |
dbXrefs | MIM : 603311 | |
HGNC : HGNC | ||
Ensembl : ENSG00000097046 | ||
HPRD : 10345 | ||
Vega : OTTHUMG00000047810 | ||
Protein | UniProt: O00311 go to UniProt's Cross Reference DB Table | |
Expression | CleanEX: HS_CDC7 | |
BioGPS: 8317 | ||
Pathway | NCI Pathway Interaction Database: CDC7 | |
KEGG: CDC7 | ||
REACTOME: CDC7 | ||
Pathway Commons: CDC7 | ||
Context | iHOP: CDC7 | |
ligand binding site mutation search in PubMed: CDC7 | ||
UCL Cancer Institute: CDC7 | ||
Assigned class in mutLBSgeneDB | B: This gene belongs to targetable_mutLBSgenes. |
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GO ID | GO Term | PubMed ID |
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Ligand binding site mutations for CDC7 |
![]() We represented ligand binding site mutations only. (You can see big image via clicking.) ![]() |
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LBS | AAchange of nsSNV | Cancer type | # samples | I64 | D62Y | COAD | 1 | M118 | G119V | COAD | 1 | I64 | D62G | COAD | 1 | M118 | G119R | COAD | 1 | M118 | G119E | COAD | 1 | I64 | D62G | OV | 1 |
cf) Cancer type abbreviation. BLCA: Bladder urothelial carcinoma, BRCA: Breast invasive carcinoma, CESC: Cervical squamous cell carcinoma and endocervical adenocarcinoma, COAD: Colon adenocarcinoma, GBM: Glioblastoma multiforme, LGG: Brain lower grade glioma, HNSC: Head and neck squamous cell carcinoma, KICH: Kidney chromophobe, KIRC: Kidney renal clear cell carcinoma, KIRP: Kidney renal papillary cell carcinoma, LAML: Acute myeloid leukemia, LUAD: Lung adenocarcinoma, LUSC: Lung squamous cell carcinoma, OV: Ovarian serous cystadenocarcinoma, PAAD: Pancreatic adenocarcinoma, PRAD: Prostate adenocarcinoma, SKCM: Skin cutaneous melanoma, STAD: Stomach adenocarcinoma, THCA: Thyroid carcinoma, UCEC: Uterine corpus endometrial carcinoma. |
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Protein structure related information for CDC7 |
![]() Mupro score denotes assessment of the effect of mutations on thermodynamic stability. (ΔΔE<0: mutation decreases stability, ΔΔE>0: mutation increases stability) |
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![]() Blue: mutations of positive stability change. and red : the most recurrent mutation for this gene. |
LBS | AAchange of nsSNV | Relative stability change | I64 | D62G | -1.4648895 | I64 | D62Y | -0.99244513 | M118 | G119E | -0.5636249 | M118 | G119V | -0.55246825 | M118 | G119R | -0.53235668 |
(MuPro1.1: Jianlin Cheng et al., Prediction of Protein Stability Changes for Single-Site Mutations Using Support Vector Machines, PROTEINS: Structure, Function, and Bioinformatics. 2006, 62:1125-1132) |
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Differential gene expression and gene-gene network for CDC7 |
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Phenotype information for CDC7 |
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Disease ID | Disease name | # PubMed | Association type |
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Allele ID | AA change | Clinical significance | Origin | Phenotype IDs |
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Pharmacological information for CDC7 |
![]() Heatmap showing the correlation between gene expression and drug response across all the cell-lines. We chose the top 20 among 138 drugs.We used Pearson's correlation coefficient. |
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Drug status | DrugBank ID | Name | Type | Drug structure |
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Ligand ID | Ligand short name | Ligand long name | PDB ID | PDB name | mutLBS | ADP | ADP | 4f99 | A | I64 M118 | ADP | ADP | 4f9a | C | I64 M118 | ADP | ADP | 4f9a | A | M118 | 0SY | 2-(PYRIDIN-4-YL)-1,5,6,7-TETRAHYDRO-4H-PYRROLO[3,2- C]PYRIDIN-4-ONE | 4f9b | C | M118 | 0SX | 8-CHLORO-2-[(2S)-PYRROLIDIN-2-YL][1]BENZOFURO[3,2- D]PYRIMIDIN-4(3H)-ONE | 4f9c | A | M118 |
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Conservation information for LBS of CDC7 |
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LBS | AA sequence | # species | Species |
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