mutLBSgeneDB |
Gene summary for CBR3 |
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Basic gene Info. | Gene symbol | CBR3 |
Gene name | carbonyl reductase 3 | |
Synonyms | HEL-S-25|SDR21C2|hCBR3 | |
Cytomap | UCSC genome browser: 21q22.2 | |
Type of gene | protein-coding | |
RefGenes | NM_001236.3, | |
Description | NADPH-dependent carbonyl reductase 3carbonyl reductase (NADPH) 3carbonyl reductase [NADPH] 3epididymis secretory protein Li 25short chain dehydrogenase/reductase family 21C, member 2 | |
Modification date | 20141207 | |
dbXrefs | MIM : 603608 | |
HGNC : HGNC | ||
Ensembl : ENSG00000159231 | ||
HPRD : 07222 | ||
Vega : OTTHUMG00000086617 | ||
Protein | UniProt: O75828 go to UniProt's Cross Reference DB Table | |
Expression | CleanEX: HS_CBR3 | |
BioGPS: 874 | ||
Pathway | NCI Pathway Interaction Database: CBR3 | |
KEGG: CBR3 | ||
REACTOME: CBR3 | ||
Pathway Commons: CBR3 | ||
Context | iHOP: CBR3 | |
ligand binding site mutation search in PubMed: CBR3 | ||
UCL Cancer Institute: CBR3 | ||
Assigned class in mutLBSgeneDB | C: This gene just belongs to mutLBSgenes. |
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GO ID | GO Term | PubMed ID |
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Ligand binding site mutations for CBR3 |
![]() We represented ligand binding site mutations only. (You can see big image via clicking.) ![]() |
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LBS | AAchange of nsSNV | Cancer type | # samples | P228 | C226G | SKCM | 1 | A92 | A92T | STAD | 1 |
cf) Cancer type abbreviation. BLCA: Bladder urothelial carcinoma, BRCA: Breast invasive carcinoma, CESC: Cervical squamous cell carcinoma and endocervical adenocarcinoma, COAD: Colon adenocarcinoma, GBM: Glioblastoma multiforme, LGG: Brain lower grade glioma, HNSC: Head and neck squamous cell carcinoma, KICH: Kidney chromophobe, KIRC: Kidney renal clear cell carcinoma, KIRP: Kidney renal papillary cell carcinoma, LAML: Acute myeloid leukemia, LUAD: Lung adenocarcinoma, LUSC: Lung squamous cell carcinoma, OV: Ovarian serous cystadenocarcinoma, PAAD: Pancreatic adenocarcinoma, PRAD: Prostate adenocarcinoma, SKCM: Skin cutaneous melanoma, STAD: Stomach adenocarcinoma, THCA: Thyroid carcinoma, UCEC: Uterine corpus endometrial carcinoma. |
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Protein structure related information for CBR3 |
![]() Mupro score denotes assessment of the effect of mutations on thermodynamic stability. (ΔΔE<0: mutation decreases stability, ΔΔE>0: mutation increases stability) |
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![]() Blue: mutations of positive stability change. and red : the most recurrent mutation for this gene. |
LBS | AAchange of nsSNV | Relative stability change | P228 | C226G | -1.6703332 | A92 | A92T | -1.1413876 |
(MuPro1.1: Jianlin Cheng et al., Prediction of Protein Stability Changes for Single-Site Mutations Using Support Vector Machines, PROTEINS: Structure, Function, and Bioinformatics. 2006, 62:1125-1132) |
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Differential gene expression and gene-gene network for CBR3 |
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Phenotype information for CBR3 |
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Disease ID | Disease name | # PubMed | Association type |
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Allele ID | AA change | Clinical significance | Origin | Phenotype IDs |
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Pharmacological information for CBR3 |
![]() Heatmap showing the correlation between gene expression and drug response across all the cell-lines. We chose the top 20 among 138 drugs.We used Pearson's correlation coefficient. |
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Drug status | DrugBank ID | Name | Type | Drug structure |
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Ligand ID | Ligand short name | Ligand long name | PDB ID | PDB name | mutLBS | NAP | NADP ZWITTERION | 2hrb | A | A92 P228 |
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Conservation information for LBS of CBR3 |
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LBS | AA sequence | # species | Species |
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