| Tag | Content |
|---|---|
| Uniprot ID | A0A286ZM09 |
| Entrez ID | |
| Genbank protein ID | HDA52207.1 |
| Genbank nucleotide ID | |
| Ensembl protein ID | ENSSSCP00000032496 |
| Ensembl nucleotide ID | ENSSSCG00000031652 |
| Gene name | Protein fantom isoform X1 |
| Gene symbol | RPGRIP1L |
| Organism | Sus scrofa |
| NCBI taxa ID | 9823 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MSGPADETAG DLPVKDIGLN LFGMGRLQET STTRTMKSLQ AVSRISREEL EDRFLRLHDE 60 NILLKQHARK QEDKIKRMAT KLIRLVNDKK RYERVGGGPK RLGRDVEMEE MIEQLQEKVH 120 ELERQNEVLK NRLISTKQQL QIQGHRHTPY NYVQSRVNTG RRKVNENAAI QECPRKGIKF 180 QDTDVAETLQ PMPAAKYGNS LLEEARGEIR NSENVIQSQR CRIEELEDLT ELLKTQLRRK 240 ENEVELSLLQ LREQQATDQR SNIRDNVEMI KLHKQLVEKS NALSVMEGKF IQLQEKQKTL 300 RISHDALMAN GDELNKQLKE QRLKCCNLEK QLRSVTFSER RVEELQDRIN DLEKERELLK 360 ENYDKLYNSA FSAAQEEQWK LKEQQLKVQI AQLETALKSD LTDKTEILDR LKTERDQNEK 420 IIQENRELQL QYLEQKQQLD ELKNRMKFYS QESDINADEL SEALLLIKDQ KSQKNGDLSF 480 LEKVDNKIYN KDLERSMKEL QATHAETVQE LEKTRNMLIM QHKINKDYQM EVEAVTQKME 540 NLQQDYELKV EQYVHLLDIR AARIQKLEAQ LKDIAYGTKQ YKFKPEIMPE DSVDAFDETI 600 HLERGENLFE IHINKVTFSS EVLQASGEKE PVTFCTYAFY DFELQTTPIV RGRHPEYNFT 660 SQYLIQVNDL FLQYIQKNTI TLEVHQAYST DYETIAACQL RFHEILEKSG RIFCTASLVG 720 TKGDIPNFGT VEYWFRLRVP MDQAIRLYRE RAKALGYITS NFKGPEKMQW LSQQAPNPAQ 780 LSSTDSTDGN LNELHITIKC CNHLQSRESH LQPHPYVVYK FFDFADHDTA IIPSSNDPQF 840 DDHMCFPVPM NMDLDRYLKS ETLSFYVFDD SDTQENIYIG KVSVPLISLA HDRCISGIFE 900 LTDHKKHPAG TIHVILKWKF AYLPPSGAIT TEDLGNFIHK EESEVVQRLP PTSSVSTLIV 960 APKPKPRRLA PKDKRVSFVD ITPHQHSETS TPPKDMKEIS PEVEHTPEIE ISMPTVSHIP 1020 KVSQENSIDQ LKEKTEKMQQ VKDDVSLLSE GQLARKSLTS SEDETEITEE LEPGDEEDKS 1080 ASDSDECIIP VPISKNVRQS SEKIQIEIIA LSLNDSRLTA DDTIQRLFVE CRFYTLPAEE 1140 TPVSLPKPRS GQWVYYNFSN VIYVDRENNQ AKRDILKAIL LKQEMPNRSV RFTVVSDPPE 1200 DEQDLECEDI GMANIDLADM FREGSDIIEQ NIDVLDTRAD GGSIGKLKVT VRALDALRSV 1260 YEQYRDDLEA |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | RPGRIP1L | 102182622 | A0A452EW23 | Capra hircus | Prediction | More>> | ||
| 1:1 ortholog | RPGRIP1L | 23322 | Q68CZ1 | Homo sapiens | Prediction | More>> | ||
| 1:1 ortholog | Rpgrip1l | 244585 | Q8CG73 | CPO,CLP,CLO | Mus musculus | Publication | More>> | |
| 1:1 ortholog | RPGRIP1L | 454089 | K7B740 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | RPGRIP1L | A0A286ZM09 | Sus scrofa | Prediction | More>> | |||
| 1:1 ortholog | Rpgrip1l | 307724 | D3Z8G3 | Rattus norvegicus | Prediction | More>> | ||
| 1:1 ortholog | rpgrip1l | 557688 | E7F4E7 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0005930 | axoneme |
| GO:0005911 | cell-cell junction |
| GO:0005813 | centrosome |
| GO:0036064 | ciliary basal body |
| GO:0035869 | ciliary transition zone |
| GO:0005829 | cytosol |
| GO:0005654 | nucleoplasm |
| GO:0005886 | plasma membrane |
| GO:0031870 | thromboxane A2 receptor binding |
| GO:0043010 | camera-type eye development |
| GO:0021549 | cerebellum development |
| GO:0090102 | cochlea development |
| GO:0022038 | corpus callosum development |
| GO:0007368 | determination of left/right symmetry |
| GO:0035115 | embryonic forelimb morphogenesis |
| GO:0035116 | embryonic hindlimb morphogenesis |
| GO:0001736 | establishment of planar polarity |
| GO:0007163 | establishment or maintenance of cell polarity |
| GO:0001701 | in utero embryonic development |
| GO:0001822 | kidney development |
| GO:0021670 | lateral ventricle development |
| GO:0001889 | liver development |
| GO:0045744 | negative regulation of G protein-coupled receptor signaling pathway |
| GO:0021532 | neural tube patterning |
| GO:1905515 | non-motile cilium assembly |
| GO:0043584 | nose development |
| GO:0021772 | olfactory bulb development |
| GO:0060039 | pericardium development |
| GO:0008589 | regulation of smoothened signaling pathway |
| PROSITE ID | PROSITE Term |
|---|---|
| PS50004 | C2 |