| Tag | Content |
|---|---|
| Uniprot ID | D3Z8G3 |
| Entrez ID | 307724 |
| Genbank protein ID | EDL87552.1 |
| Genbank nucleotide ID | XM_017601283.1; NM_001107414.1; |
| Ensembl protein ID | ENSRNOP00000015876 |
| Ensembl nucleotide ID | ENSRNOG00000011829 |
| Gene name | Rpgrip1-like |
| Gene symbol | Rpgrip1l |
| Organism | Rattus norvegicus |
| NCBI taxa ID | 10116 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MSGPSDETAG DLPVKDTGLH LFGIGGLQET STARTVKARQ AVSRVSREEL EDRFLRLHDE 60 NILLKQHARK QEDKIKRMAT KLIRLVNDKK RYERVGGGPK RLGRDVEMEE MIEQLQEKVH 120 ELERQNEVLK NRLISAKQQL QVQGHRQTSY SRVQARTNTG RRKASTTAGL QECLGKGIKV 180 QNVDEAETVQ PTLTKYSSGL LEEARGEIRN LENVIQSQRG QIEELEHLAE ILKTQLKRKE 240 NEIELSLLQL REQQATDQRS NIRDNVEMIK LHKQLVEKSN ALSVIEGKFI QLQEKQRTLR 300 ISHDALMANG DELNMQLKEQ RLKCCSLEKQ LHSVRFSERR VEELQDRIND LEKERELLKE 360 NYDKLYNSAF SAAHEEQWKL KEQQMKVQIA QLETALKSDL TDKAEVLDQL KTERDQNEKL 420 VQENRDLQLQ CLQQKQQLHE LQNRMKFFNQ ESDINVDDLS EALLLIKAQK EQKNGDLSFL 480 EKVDSKINKD LDRSMKELQA THAETVQELE KTRNMLIMQH KINKDYQMEV ETVTQKMENL 540 QQDHELKVEQ YVHLLDVRAA RIQKLEAQLK DIAYGTKQYK FKPEIMPDDS VDEFDETIHL 600 ERGENLFEIH INKVAFASDV LRASGDKELL TFCTYAFYDF ELQTTPIVRG PCPEYNFTSQ 660 YLVHVNDLFL QYIQKNTVTL ELHQAYSTDY ETVAACQLRF HEILEKSGRI FCTTSLVGTK 720 GDIPNFGTVE YWFRLRVPMD QAIRLYRERA KALGYITSNF KKPEKMQLLS QQAATTAQIS 780 SPESTDGNLN ELHITVRCCT NLQSRARHLQ PHAYVVYKFF DFPDHDTAII PSSNDPQFDD 840 YMCFPVPMNM DLDRYLKSES LSFYVFDDSD IQENIYIGKV NVPLISLAHD RCISGIFELM 900 DKDKHAAGTI QVILKWKFTY LPPSGSIPTE DLGRFVGREE PEAIQRRPPT SSGTEAVVTP 960 KPKPRQRLTF VDKKVSFVDT MPHPSPEASP PPKDIKHNSP EVGPETENSM PAVACPSKES 1020 SVAKVEENMG KTQQGKEDDI SFLSEGQLAS QSVASSEDET EITEELEPED EDRSASDSDD 1080 CIIPSSVSTD TKKPSEEIRI EIIALSLNDS QITREDTVQR LFIECRFYSL PAEETPMSLP 1140 KPKSGQWVYY NYTHVLYLDK ENNPAVRDVL KAVLQRRELP HRSVRFTVVS DPPEDEQDLE 1200 CEDIGVAHLD LVDVFQKGRD IIEQDIDVLD ARTDGGSIGK LKVTVEALHA LRSVYEQYRK 1260 DLEA 1264 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | RPGRIP1L | 102182622 | A0A452EW23 | Capra hircus | Prediction | More>> | ||
| 1:1 ortholog | RPGRIP1L | 23322 | Q68CZ1 | Homo sapiens | Prediction | More>> | ||
| 1:1 ortholog | Rpgrip1l | 244585 | Q8CG73 | CPO,CLP,CLO | Mus musculus | Publication | More>> | |
| 1:1 ortholog | RPGRIP1L | 454089 | K7B740 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | RPGRIP1L | A0A286ZM09 | Sus scrofa | Prediction | More>> | |||
| 1:1 ortholog | Rpgrip1l | 307724 | D3Z8G3 | Rattus norvegicus | Prediction | More>> | ||
| 1:1 ortholog | rpgrip1l | 557688 | E7F4E7 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0005879 | axonemal microtubule |
| GO:0005930 | axoneme |
| GO:0005911 | cell-cell junction |
| GO:0005813 | centrosome |
| GO:0036064 | ciliary basal body |
| GO:0035253 | ciliary rootlet |
| GO:0035869 | ciliary transition zone |
| GO:0005929 | cilium |
| GO:0005737 | cytoplasm |
| GO:0005829 | cytosol |
| GO:0005654 | nucleoplasm |
| GO:0032391 | photoreceptor connecting cilium |
| GO:0005886 | plasma membrane |
| GO:0031870 | thromboxane A2 receptor binding |
| GO:0007420 | brain development |
| GO:0043010 | camera-type eye development |
| GO:0021549 | cerebellum development |
| GO:0060271 | cilium assembly |
| GO:0090102 | cochlea development |
| GO:0022038 | corpus callosum development |
| GO:0007368 | determination of left/right symmetry |
| GO:0035115 | embryonic forelimb morphogenesis |
| GO:0035116 | embryonic hindlimb morphogenesis |
| GO:0001736 | establishment of planar polarity |
| GO:0007163 | establishment or maintenance of cell polarity |
| GO:0060322 | head development |
| GO:0001701 | in utero embryonic development |
| GO:0001822 | kidney development |
| GO:0021670 | lateral ventricle development |
| GO:0035108 | limb morphogenesis |
| GO:0001889 | liver development |
| GO:0045744 | negative regulation of G protein-coupled receptor signaling pathway |
| GO:0021532 | neural tube patterning |
| GO:1905515 | non-motile cilium assembly |
| GO:0043584 | nose development |
| GO:0021772 | olfactory bulb development |
| GO:0060039 | pericardium development |
| GO:0008589 | regulation of smoothened signaling pathway |
| GO:0021537 | telencephalon development |