Gene: SMAD1

Basic information

Tag Content
Uniprot ID A0A5F9CKV6
Entrez ID 100341544
Genbank protein ID
Genbank nucleotide ID XM_017347315.1; XM_008267391.2; XM_008267390.2;
Ensembl protein ID ENSOCUP00000034294
Ensembl nucleotide ID ENSOCUG00000017920
Gene name Mothers against decapentaplegic homolog
Gene symbol SMAD1
Organism Oryctolagus cuniculus
NCBI taxa ID 9986
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MNVTSLFSFT SPAVKRLLGW KQGDEEEKWA EKAVDALVKK LKKKKGAMEE LEKALSCPGQ 60
PSSCVTIPRS LDGRLQVSHR KGLPHVIYCR VWRWPDLQSH HELKPLECCE FPFGSKQKEV 120
CINPYHYKRV ESPVLPPVLV PRHSEYNPQH SLLAQFRNLG QNEPHMPLNA TFPDSFQQPG 180
SHPFPHSPNS SYPNSPGGSS STYPHSPSSS DPGSPFQMPA ETPPPAYLPP EDAMTQDGSQ 240
PMDTNMMAPS LPSDINRGDV HVVAYEEPKH WCSIVYYELN NRVGEAFHAS STSVLVDGFT 300
DPSNNKNRFC LGLLSNVNRN STIENTRRHI GKGVHLYYVG GEVYAECLSD SSIFVQSRNC 360
NYHHGFHPTT VCKIPSGCSL KIFNNQEFAQ LLAQSVNHGF ETVYELTKMC TIRMSFVKGW 420
GAEYHRQDVT STPCWIEIHL HGPLQWLDKV LTQMGPPHNP ISSVS 465

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologSMAD1540488Q1JQA2Bos taurusPredictionMore>>
1:1 orthologSMAD1475456E2QZF1Canis lupus familiarisPredictionMore>>
1:1 orthologSMAD1A0A452E7S9Capra hircusPredictionMore>>
1:1 orthologSMAD1100033850F6W0G0Equus caballusPredictionMore>>
1:1 orthologSMAD14086Q15797Homo sapiensPublicationMore>>
1:1 orthologSmad117125P70340E13.5, E14.5Mus musculusPredictionMore>>
1:1 orthologSMAD1H2QQ88Pan troglodytesPredictionMore>>
1:1 orthologSMAD1397016Q864V7Sus scrofaPredictionMore>>
1:1 orthologSMAD1100341544A0A5F9CKV6Oryctolagus cuniculusPredictionMore>>
1:1 orthologSmad1A0A0G2JSQ6Rattus norvegicusPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005737 cytoplasm
GO:0005634 nucleus
GO:0005667 transcription factor complex
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
GO:0007179 transforming growth factor beta receptor signaling pathway

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0175 Coiled coil
KW-0963 Cytoplasm
KW-0238 DNA-binding
KW-0539 Nucleus
KW-1185 Reference proteome
KW-0804 Transcription
KW-0805 Transcription regulation

Interpro

InterPro ID InterPro Term
IPR013790 Dwarfin
IPR003619 MAD_homology1_Dwarfin-type
IPR013019 MAD_homology_MH1
IPR017855 SMAD-like_dom_sf
IPR001132 SMAD_dom_Dwarfin-type
IPR008984 SMAD_FHA_dom_sf
IPR036578 SMAD_MH1_sf

PROSITE

PROSITE ID PROSITE Term
PS51075 MH1
PS51076 MH2

Pfam

Pfam ID Pfam Term
PF03165 MH1
PF03166 MH2