| Tag | Content |
|---|---|
| Uniprot ID | B1H282 |
| Entrez ID | 290637 |
| Genbank protein ID | AAI60899.1; EDL90767.1; |
| Genbank nucleotide ID | NM_001106067.2 |
| Ensembl protein ID | ENSRNOP00000024866 |
| Ensembl nucleotide ID | ENSRNOG00000023317 |
| Gene name | Collagen beta(1-O)galactosyltransferase 1 |
| Gene symbol | Colgalt1 |
| Organism | Rattus norvegicus |
| NCBI taxa ID | 10116 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MAALPCWSRG LLLLPLLLLL LLLGGPRGAD GYFPEERWSP ESPLQAPRVL IALLARNAAP 60 ALPATLGALE RLRHPRERTA LWVATDHNTD NTSAILREWL VAVKGLYHSV EWRPAEEPSS 120 YPDEEGPKHW SDSRYEHVMK LRQAALKSAR DMWADYILFV DSDNLITNPD TLSLLIAENK 180 TVVAPMLDSR AAYSNFWCGM TSQGYYKRTP AYIPIRKRDR RGCFAVPMVH STFLIDLRKA 240 ASRNLAFYPP HPDYTWSFDD IIVFAFSCKQ AEVQMYVCNK EVYGFLPVPL RSHSSLQDEA 300 ESFMHVQLEV MVKHPPVQLS RFISAPKKTA DKMGFDEVFM INLKRRLDRR ERMLRALHEQ 360 EIDFQLVEAV DGKAMNTSQV EAMGIQMLPG YRDPYHGRPL TKGELGCFLS HYNIWKEVVD 420 RGLQKSLVFE DDLRFEIFFK RRLMNLMQDV EREGLDWDLI YVGRKRMQVE HPEKAVPRVR 480 NLVEADYSYW TLAYVISLQG AQKLLAAKPL AKMLPVDEFL PVMFDKHPMS EYKSHFSPRN 540 LRAFSVEPLL IYPTHYTGDD GYVSDTETSV VWNNEQVKTD WDRAKSQKMR EQQALSREAK 600 NSDVLQSPLD STARDEL 617 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | COLGALT1 | 513167 | A5PK45 | Bos taurus | Prediction | More>> | ||
| 1:1 ortholog | COLGALT1 | 484834 | F1PMG8 | Canis lupus familiaris | Prediction | More>> | ||
| 1:1 ortholog | COLGALT1 | 102172883 | A0A452FC06 | Capra hircus | Prediction | More>> | ||
| 1:1 ortholog | COLGALT1 | 79709 | Q8NBJ5 | Homo sapiens | Prediction | More>> | ||
| 1:1 ortholog | Colgalt1 | 234407 | Q8K297 | CPO | Mus musculus | Publication | More>> | |
| 1:1 ortholog | COLGALT1 | H2R6A5 | Pan troglodytes | Prediction | More>> | |||
| 1:1 ortholog | COLGALT1 | F1S940 | Sus scrofa | Prediction | More>> | |||
| 1:1 ortholog | Colgalt1 | 290637 | B1H282 | Rattus norvegicus | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0005788 | endoplasmic reticulum lumen |
| GO:0050211 | procollagen galactosyltransferase activity |
| GO:1904028 | positive regulation of collagen fibril organization |
| Pfam ID | Pfam Term |
|---|---|
| PF01755 | Glyco_transf_25 |