Gene: COLGALT1

Basic information

Tag Content
Uniprot ID H2R6A5; A0A2J8LTL7;
Entrez ID
Genbank protein ID JAA17831.1; JAA17832.1; JAA17834.1; JAA29062.1; JAA08320.1; JAA08321.1; JAA17833.1; JAA29061.1;
Genbank nucleotide ID XM_512497.6
Ensembl protein ID ENSPTRP00000048910
Ensembl nucleotide ID ENSPTRG00000010680
Gene name Collagen beta(1-O)galactosyltransferase 1
Gene symbol COLGALT1
Organism Pan troglodytes
NCBI taxa ID 9598
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MAAAPRAGRR RGQSLLALLL LLLAPLPPGA PPGADAYFPE ERWSPESPLQ APRVLIALLA 60
RNAAHALPTT LGALERLRHP RERTALWVAT DHNMDNTSTV LREWLVAVKS LYHSVEWRPA 120
EEPRSYPDEE GPKHWSDSRY EHVMKLRQAA LKSARDMWAD YILFVDADNL ILNPDTLSLL 180
IAENKTVVAP MLDSRAAYSN FWCGMTSQGY YKRTPAYIPI RKRDRRGCFA VPMVHSTFLI 240
DLRKAASRNL AFYPPHPDYT WSFDDIIVFA FSCKQAEVQM YVCNKEEYGF LPVPLRAHST 300
LQDEAESFMH VQLEVMVKHP PAEPSRFISA PTKTPDKMGF DEVFMINLRR RQDRRERMLR 360
ALQAQEIECR LVEAVDGKAM NTSQVEALGI QMLPGYRDPY HGRPLTKGEL GCFLSHYNIW 420
KEVVDRGLQK SLVFEDDLRF EIFFKRRLMN LMRDVEREGL DWDLIYVGRK RMQVEHPEKA 480
VPRVRNLVEA DYSYWTLAYV ISLQGARKLL AAEPLSKMLP VDEFLPVMFD KHPVSEYKAH 540
FSLRNLHAFS VEPLLIYPTH YTGDDGYVSD TETSVVWNNE HVKTDWDRAK SQKMREQQAL 600
SREAKNSDVL QSPLDSAARD EL 622

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologCOLGALT1513167A5PK45Bos taurusPredictionMore>>
1:1 orthologCOLGALT1484834F1PMG8Canis lupus familiarisPredictionMore>>
1:1 orthologCOLGALT1102172883A0A452FC06Capra hircusPredictionMore>>
1:1 orthologCOLGALT179709Q8NBJ5Homo sapiensPredictionMore>>
1:1 orthologColgalt1234407Q8K297CPOMus musculusPublicationMore>>
1:1 orthologCOLGALT1H2R6A5Pan troglodytesPredictionMore>>
1:1 orthologCOLGALT1F1S940Sus scrofaPredictionMore>>
1:1 orthologColgalt1290637B1H282Rattus norvegicusPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005788 endoplasmic reticulum lumen
GO:0050211 procollagen galactosyltransferase activity
GO:1904028 positive regulation of collagen fibril organization

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0175 Coiled coil
KW-1185 Reference proteome
KW-0732 Signal
KW-0808 Transferase

Interpro

InterPro ID InterPro Term
IPR002654 Glyco_trans_25
IPR029044 Nucleotide-diphossugar_trans

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF01755 Glyco_transf_25