Gene: Tmem107

Basic information

Tag Content
Uniprot ID D3ZFW5
Entrez ID 691750
Genbank protein ID EDM04836.1
Genbank nucleotide ID NM_001109648.1
Ensembl protein ID ENSRNOP00000008787
Ensembl nucleotide ID ENSRNOG00000006519
Gene name Transmembrane protein 107
Gene symbol Tmem107
Organism Rattus norvegicus
NCBI taxa ID 10116
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description Plays a role in cilia formation and embryonic patterning. Requires for normal Sonic hedgehog (Shh) signaling in the neural tube and acts in combination with GLI2 and GLI3 to pattern ventral and intermediate neuronal cell types (By similarity). During ciliogenesis regulates the ciliary transition zone localization of some MKS complex proteins (By similarity).
Sequence
MGRISGLVPS RFLTLLAHLV IVITLFWSRE SNIQACLPLK FTPEEYEKQD NQLVAALCLT 60
LGLFAVELAG FLSGVSMFNS TQSLLSIAAH CSASVALSFF IFERWECTTY WYIFAFCSAF 120
PAVTETALFI AVFGLKKKPF

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologTMEM107509812A4IFS9Bos taurusPredictionMore>>
1:1 orthologTMEM107102173966A0A452G122Capra hircusPredictionMore>>
1:1 orthologTMEM107100062420F6ZQI0Equus caballusPredictionMore>>
1:1 orthologTMEM10784314Q6UX40Homo sapiensPredictionMore>>
1:1 orthologTmem10766910Q9CPV0CPOMus musculusPublicationMore>>
1:1 orthologTMEM107100620379I3LUH9Sus scrofaPredictionMore>>
1:1 orthologTmem107691750D3ZFW5Rattus norvegicusPredictionMore>>

Gene ontology

GO ID GO Term
GO:0035869 ciliary transition zone
GO:0016021 integral component of membrane
GO:0036038 MKS complex
GO:0060271 cilium assembly
GO:0042733 embryonic digit morphogenesis
GO:0021532 neural tube patterning
GO:1905515 non-motile cilium assembly
GO:1904491 protein localization to ciliary transition zone

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0966 Cell projection
KW-0970 Cilium biogenesis/degradation
KW-0325 Glycoprotein
KW-0472 Membrane
KW-1185 Reference proteome
KW-0812 Transmembrane
KW-1133 Transmembrane helix

Interpro

InterPro ID InterPro Term
IPR029248 TMEM107

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF14995 TMEM107