| Tag | Content |
|---|---|
| Uniprot ID | F1RM47 |
| Entrez ID | |
| Genbank protein ID | |
| Genbank nucleotide ID | |
| Ensembl protein ID | ENSSSCP00000003340 |
| Ensembl nucleotide ID | ENSSSCG00000003085 |
| Gene name | CLPTM1 regulator of GABA type A receptor forward trafficking |
| Gene symbol | CLPTM1 |
| Organism | Sus scrofa |
| NCBI taxa ID | 9823 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | WCRSQTRLGS GIAVAVAKVT SNGSIGRDPP AETQPQNPPP SQPSTCPACL RRIFIIWAIS 60 SWFRRGPAPQ DQAGPGGAPR VASRNLFPKD TLMNLHVYIS EHEHFTDFNA TSALFWEQHD 120 LVYGDWTSGE NSDGCYEHFA ELDIPQSVQQ NGSIYIHVYF TKSGFHPDPR QKALYRRLAT 180 VHMSRMINKY KRRRFQKTKN LLTGETEADP EMIKRAEDYG PVEVISHWHP NITINIVDDH 240 TPWVKGSVPP PLDQYVKFDA VSGDYYPIIY FNDYWNLQKD YYPINESLAS LPLRVSFCPL 300 SLWRWQLYAA QSTKSPWNFL GDELYEQSDE EQDSVKVALL ETNPYLLALT IVVSIVHSVF 360 EFLAFKNDIQ FWNSRQSLEG LSVRSVFFGV FQSFVVLLYI LDNETNFVVQ VSVFIGVLID 420 LWKITKVMDV RVRPAQVAGL FPRPTFKDKS TYVESSTKVY DDMAFRYLSW ILFPLLGCYA 480 VYSLLYLEHK GWYSWVLSML YGFLLTFGFI TMTPQLFINY KLKSVAHLPW RMLTYKALNT 540 FIDDLFAFVI KMPVMYRIGC LRDDVVFFIY LYQRWIYRVD PTRVNEFGMS GEAPTAAAPV 600 AEAPTAEEAS VPLPPQEAPP KPAEDKKRD 629 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | CLPTM1 | A0A452DSC6 | Capra hircus | Prediction | More>> | |||
| 1:1 ortholog | CLPTM1 | 1209 | O96005 | Homo sapiens | Publication | More>> | ||
| 1:1 ortholog | Clptm1 | 56457 | Q8VBZ3 | Mus musculus | Prediction | More>> | ||
| 1:1 ortholog | CLPTM1 | A0A2I3TN30 | Pan troglodytes | Prediction | More>> | |||
| 1:1 ortholog | CLPTM1 | F1RM47 | Sus scrofa | Prediction | More>> | |||
| 1:1 ortholog | CLPTM1 | G1T1T8 | Oryctolagus cuniculus | Prediction | More>> | |||
| 1:1 ortholog | Clptm1 | 292696 | B2RYF6 | Rattus norvegicus | Prediction | More>> | ||
| 1:1 ortholog | clptm1 | 795480 | F1R5K1 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0016021 | integral component of membrane |
| InterPro ID | InterPro Term |
|---|---|
| IPR008429 | CLPTM1 |
| Pfam ID | Pfam Term |
|---|---|
| PF05602 | CLPTM1 |