| Tag | Content |
|---|---|
| Uniprot ID | F2Z3U1 |
| Entrez ID | 64566 |
| Genbank protein ID | |
| Genbank nucleotide ID | NM_022631.2 |
| Ensembl protein ID | ENSRNOP00000021164 |
| Ensembl nucleotide ID | ENSRNOG00000015618 |
| Gene name | Protein Wnt |
| Gene symbol | Wnt5a |
| Organism | Rattus norvegicus |
| NCBI taxa ID | 10116 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | Ligand for members of the frizzled family of seven transmembrane receptors. |
| Sequence | MKKPIGILSP GVALGTAGGA MSSKFFLMAL ATFFSFAQVV IEANSWWSLG MNNPVQMSEV 60 YIIGAQPLCS QLAGLSQGQK KLCHLYQDHM QYIGEGAKTG IKECQYQFRH RRWNCSTVDN 120 TSVFGRVMQI GSRETAFTYA VSAAGVVNAM SRACREGELS TCGCSRAARP KDLPRDWLWG 180 GCGDNIDYGY RFAKEFVDAR ERERIHAKGS YESARILMNL HNNEAGRRTV YNLADVACKC 240 HGVSGSCSLK TCWLQLADFR KVGDALKEKY DSAAAMRLNS RGKLVQVNSR FNSPTTQDLV 300 YIDPSPDYCV RNESTGSLGT QGRLCNKTSE GMDGCELMCC GRGYDQFKTV QTERCHCKFH 360 WCCYVKCKKC TEIVDQFVCK |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | WNT5A | 530005 | E1BDG5 | Bos taurus | Prediction | More>> | ||
| 1:1 ortholog | WNT5A | 484721 | J9P5H0 | Canis lupus familiaris | Prediction | More>> | ||
| 1:1 ortholog | WNT5A | 102170921 | A0A452EUB6 | Capra hircus | Prediction | More>> | ||
| 1:1 ortholog | WNT5A | 7474 | P41221 | Homo sapiens | Publication | More>> | ||
| 1:1 ortholog | Wnt5a | 22418 | P22725 | CPO | E14.5 | Mus musculus | Publication | More>> |
| 1:1 ortholog | WNT5A | 100627056 | A0A287A1J0 | Sus scrofa | Prediction | More>> | ||
| 1:1 ortholog | Wnt5a | 64566 | F2Z3U1 | Rattus norvegicus | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0009986 | cell surface |
| GO:0031012 | extracellular matrix |
| GO:0005615 | extracellular space |
| GO:0098978 | glutamatergic synapse |
| GO:0098794 | postsynapse |
| GO:1902379 | chemoattractant activity involved in axon guidance |
| GO:0005125 | cytokine activity |
| GO:0003700 | DNA-binding transcription factor activity |
| GO:0005109 | frizzled binding |
| GO:0019904 | protein domain specific binding |
| GO:0005115 | receptor tyrosine kinase-like orphan receptor binding |
| GO:0044212 | transcription regulatory region DNA binding |
| GO:0090630 | activation of GTPase activity |
| GO:0007257 | activation of JUN kinase activity |
| GO:0032148 | activation of protein kinase B activity |
| GO:0008595 | anterior/posterior axis specification, embryo |
| GO:0003283 | atrial septum development |
| GO:0060070 | canonical Wnt signaling pathway |
| GO:0034613 | cellular protein localization |
| GO:0071277 | cellular response to calcium ion |
| GO:0071346 | cellular response to interferon-gamma |
| GO:0071222 | cellular response to lipopolysaccharide |
| GO:0071560 | cellular response to transforming growth factor beta stimulus |
| GO:0060067 | cervix development |
| GO:0036517 | chemoattraction of serotonergic neuron axon |
| GO:0036518 | chemorepulsion of dopaminergic neuron axon |
| GO:0090103 | cochlea morphogenesis |
| GO:0060028 | convergent extension involved in axis elongation |
| GO:0060029 | convergent extension involved in organogenesis |
| GO:0042733 | embryonic digit morphogenesis |
| GO:0048706 | embryonic skeletal system development |
| GO:0060750 | epithelial cell proliferation involved in mammary gland duct elongation |
| GO:0045198 | establishment of epithelial cell apical/basal polarity |
| GO:0001736 | establishment of planar polarity |
| GO:0060324 | face development |
| GO:0001947 | heart looping |
| GO:0071425 | hematopoietic stem cell proliferation |
| GO:0007442 | hindgut morphogenesis |
| GO:0048850 | hypophysis morphogenesis |
| GO:0030216 | keratinocyte differentiation |
| GO:0060599 | lateral sprouting involved in mammary gland duct morphogenesis |
| GO:0030324 | lung development |
| GO:0008584 | male gonad development |
| GO:0060744 | mammary gland branching involved in thelarche |
| GO:0097325 | melanocyte proliferation |
| GO:0060638 | mesenchymal-epithelial cell signaling |
| GO:0060809 | mesodermal to mesenchymal transition involved in gastrulation |
| GO:0007494 | midgut development |
| GO:0043066 | negative regulation of apoptotic process |
| GO:0048843 | negative regulation of axon extension involved in axon guidance |
| GO:0030514 | negative regulation of BMP signaling pathway |
| GO:1904934 | negative regulation of cell proliferation in midbrain |
| GO:0050680 | negative regulation of epithelial cell proliferation |
| GO:0045599 | negative regulation of fat cell differentiation |
| GO:0040037 | negative regulation of fibroblast growth factor receptor signaling pathway |
| GO:0048022 | negative regulation of melanin biosynthetic process |
| GO:0072201 | negative regulation of mesenchymal cell proliferation |
| GO:0060686 | negative regulation of prostatic bud formation |
| GO:0051964 | negative regulation of synapse assembly |
| GO:0045892 | negative regulation of transcription, DNA-templated |
| GO:0038031 | non-canonical Wnt signaling pathway via JNK cascade |
| GO:0048570 | notochord morphogenesis |
| GO:0021891 | olfactory bulb interneuron development |
| GO:0048341 | paraxial mesoderm formation |
| GO:0003402 | planar cell polarity pathway involved in axis elongation |
| GO:1904938 | planar cell polarity pathway involved in axon guidance |
| GO:0061350 | planar cell polarity pathway involved in cardiac muscle tissue morphogenesis |
| GO:0061349 | planar cell polarity pathway involved in cardiac right atrium morphogenesis |
| GO:0060775 | planar cell polarity pathway involved in gastrula mediolateral intercalation |
| GO:0090179 | planar cell polarity pathway involved in neural tube closure |
| GO:0061347 | planar cell polarity pathway involved in outflow tract morphogenesis |
| GO:0061354 | planar cell polarity pathway involved in pericardium morphogenesis |
| GO:0061348 | planar cell polarity pathway involved in ventricular septum morphogenesis |
| GO:0045766 | positive regulation of angiogenesis |
| GO:0061036 | positive regulation of cartilage development |
| GO:2000049 | positive regulation of cell-cell adhesion mediated by cadherin |
| GO:0045080 | positive regulation of chemokine biosynthetic process |
| GO:0002741 | positive regulation of cytokine secretion involved in immune response |
| GO:0045807 | positive regulation of endocytosis |
| GO:0010595 | positive regulation of endothelial cell migration |
| GO:0001938 | positive regulation of endothelial cell proliferation |
| GO:0048146 | positive regulation of fibroblast proliferation |
| GO:0045745 | positive regulation of G protein-coupled receptor signaling pathway |
| GO:0090082 | positive regulation of heart induction by negative regulation of canonical Wnt signaling pathway |
| GO:0050729 | positive regulation of inflammatory response |
| GO:0032729 | positive regulation of interferon-gamma production |
| GO:0050718 | positive regulation of interleukin-1 beta secretion |
| GO:0032755 | positive regulation of interleukin-6 production |
| GO:2000484 | positive regulation of interleukin-8 secretion |
| GO:0043032 | positive regulation of macrophage activation |
| GO:0060907 | positive regulation of macrophage cytokine production |
| GO:0045836 | positive regulation of meiotic nuclear division |
| GO:0002053 | positive regulation of mesenchymal cell proliferation |
| GO:1901216 | positive regulation of neuron death |
| GO:0150012 | positive regulation of neuron projection arborization |
| GO:0051092 | positive regulation of NF-kappaB transcription factor activity |
| GO:2000052 | positive regulation of non-canonical Wnt signaling pathway |
| GO:0045778 | positive regulation of ossification |
| GO:0033138 | positive regulation of peptidyl-serine phosphorylation |
| GO:0010800 | positive regulation of peptidyl-threonine phosphorylation |
| GO:0032092 | positive regulation of protein binding |
| GO:0045732 | positive regulation of protein catabolic process |
| GO:1900020 | positive regulation of protein kinase C activity |
| GO:0090037 | positive regulation of protein kinase C signaling |
| GO:0010820 | positive regulation of T cell chemotaxis |
| GO:0070245 | positive regulation of thymocyte apoptotic process |
| GO:0051885 | positive regulation of timing of anagen |
| GO:0045944 | positive regulation of transcription by RNA polymerase II |
| GO:1904469 | positive regulation of tumor necrosis factor secretion |
| GO:0060340 | positive regulation of type I interferon-mediated signaling pathway |
| GO:0036342 | post-anal tail morphogenesis |
| GO:0003138 | primary heart field specification |
| GO:0090009 | primitive streak formation |
| GO:0060762 | regulation of branching involved in mammary gland duct morphogenesis |
| GO:1903827 | regulation of cellular protein localization |
| GO:0043122 | regulation of I-kappaB kinase/NF-kappaB signaling |
| GO:0099175 | regulation of postsynapse organization |
| GO:0099566 | regulation of postsynaptic cytosolic calcium ion concentration |
| GO:0003139 | secondary heart field specification |
| GO:0062009 | secondary palate development |
| GO:0001756 | somitogenesis |
| GO:0003323 | type B pancreatic cell development |
| GO:0060157 | urinary bladder development |
| GO:0060065 | uterus development |
| GO:0060068 | vagina development |
| GO:1904953 | Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation |
| GO:0007223 | Wnt signaling pathway, calcium modulating pathway |
| GO:0042060 | wound healing |
| PROSITE ID | PROSITE Term |
|---|---|
| PS00246 | WNT1 |
| Pfam ID | Pfam Term |
|---|---|
| PF00110 | wnt |