Entrez Gene

Pulmonary Arterial Hypertension KnowledgeBase (PAHKB)

General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information
Gene ID	961
Name	CD47
Synonymous	IAP\|MER6\|OA3;CD47 molecule;CD47;CD47 molecule
Definition	CD47 antigen (Rh-related antigen, integrin-associated signal transducer)\|CD47 glycoprotein\|Rh-related antigen\|antigen identified by monoclonal antibody 1D8\|antigenic surface determinant protein OA3\|integrin associated protein\|integrin-associated protein\|i
Position	3q13.1-q13.2
Gene Type	protein-coding
Gene Regulation:	ENCODE RegulomeDB Transcription Factors Post Transcriptional Modification From dbPTM Methylation Profile From DiseaseMeth database

Link to UCSC genome	Matched SNP location	dbSNP ID	Regulatory information
ENCODE RegulomeDB [Top]
chr3:107762145-107809872	chr3:107780738-107780738	rs3804638	Single_Nucleotides\|eQTL\|IFT57, Motifs\|PWM\|Srf, Motifs\|PWM\|Srf, Motifs\|PWM\|Tcfap2e, Protein_Binding\|ChIP-seq\|GATA1

Regulation From TransFac database
Transcription Factors [Top]
CD47(h) --> IAP(h) (expression).
CD47(h) --> IAP-isoform1(h) (expression).
CD47(h) --> IAP-isoform2(h) (expression).
CD47(h) --> IAP-isoform3(h) (expression).
CD47(h) --> IAP-isoform4(h) (expression).

Location (AA)	PTM type	Literature	Database
Post Transcriptional Modification [Top]
19	Pyrrolidone carboxylic acid (Probable).		Swiss-Prot 53.0
23	N-linked (GlcNAc...) (Potential).		Swiss-Prot 53.0
34	N-linked (GlcNAc...).		Swiss-Prot 53.0
50	N-linked (GlcNAc...) (Potential).		Swiss-Prot 53.0
73	N-linked (GlcNAc...).		Swiss-Prot 53.0
111	N-linked (GlcNAc...).		Swiss-Prot 53.0
206	N-linked (GlcNAc...) (Potential).		Swiss-Prot 53.0

Chromosome	Location	Source
Methylation Profile [Top]
chr3	Promoter: 109292125 - 109294125	Agilent_014791
chr3	Promoter: 109292125 - 109294125	GSE27584
chr3	Promoter: 109292125 - 109294125	GSE27584
chr3	Promoter: 109292125 - 109294125	GSE27584
chr3	Promoter: 109292125 - 109294125	Agilent_014791_44K

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