Gene Page

Gene Page: RCAN2

Summary

GeneID

10231

Symbol

RCAN2

Synonyms

Description

regulator of calcineurin 2

Locus tag

RP11-38F19.1

Gene type

protein-coding

Map location

6p12.3

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_IIE

genome scan meta-analysis (European-ancestry samples)

Psr: 0.04433

GO_Annotation

Mapping neuro-related keywords to Gene Ontology annotations

Hits with neuro-related keywords: 1

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0030346

protein phosphatase 2B binding

NAS

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0007417

central nervous system development

NAS

Brain (GO term level: 6)

GO:0019722

calcium-mediated signaling

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005575

cellular_component

Interactions

Shown by Network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
PPP3CA	CALN \| CALNA \| CALNA1 \| CCN1 \| CNA1 \| PPP2B	protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform	Reconstituted Complex	BioGRID	12102656

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-1/206	460	466	m8	hsa-miR-1	UGGAAUGUAAAGAAGUAUGUA
				hsa-miR-206^SZ	UGGAAUGUAAGGAAGUGUGUGG
				hsa-miR-613	AGGAAUGUUCCUUCUUUGCC
miR-128	1543	1549	1A	hsa-miR-128a	UCACAGUGAACCGGUCUCUUUU
miR-128	1543	1549	1A	hsa-miR-128b	UCACAGUGAACCGGUCUCUUUC
miR-137	1554	1560	1A	hsa-miR-137	UAUUGCUUAAGAAUACGCGUAG
miR-138	482	489	1A,m8	hsa-miR-138^brain	AGCUGGUGUUGUGAAUC
miR-149	288	294	1A	hsa-miR-149^brain	UCUGGCUCCGUGUCUUCACUCC
miR-153	2268	2274	1A	hsa-miR-153	UUGCAUAGUCACAAAAGUGA
miR-27	1543	1550	1A,m8	hsa-miR-27a^brain	UUCACAGUGGCUAAGUUCCGC
miR-27	1543	1550	1A,m8	hsa-miR-27b^brain	UUCACAGUGGCUAAGUUCUGC
miR-326	290	296	1A	hsa-miR-326	CCUCUGGGCCCUUCCUCCAG
miR-330	1681	1688	1A,m8	hsa-miR-330^brain	GCAAAGCACACGGCCUGCAGAGA
miR-381	823	829	1A	hsa-miR-381	UAUACAAGGGCAAGCUCUCUGU
miR-383	1514	1520	1A	hsa-miR-383^brain	AGAUCAGAAGGUGAUUGUGGCU
miR-448	2268	2274	1A	hsa-miR-448	UUGCAUAUGUAGGAUGUCCCAU
miR-488	863	869	1A	hsa-miR-488	CCCAGAUAAUGGCACUCUCAA
miR-488	863	869	1A	hsa-miR-488	CCCAGAUAAUGGCACUCUCAA
miR-9	670	676	1A	hsa-miR-9^SZ	UCUUUGGUUAUCUAGCUGUAUGA

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.