|
|
| GeneID |
10388
|
| Symbol |
SYCP2
|
| Synonyms |
SCP2
|
| Description |
synaptonemal complex protein 2 |
| See related |
HGNC:11490|MIM:604105|Ensembl:ENSG00000196074|HPRD:06822| |
| Locus tag |
- |
| Gene type |
protein-coding |
| Map location |
20q13.33 |
|
| |
|
|
| Gene set name |
Method of gene set |
Evidence |
Info |
| GO_Annotation | Mapping neuro-related keywords to Gene Ontology annotations | Hits with neuro-related keywords: 1 | |
|
| |
| General Gene Expression (microarray) ? |
|
 |
| |
| Gene Expression in Brain Regions (new) |
|
| |
| Top co-expressed genes in Brain Regions (new) |
|
| Gene | Pearson's Correlation | Spearman's Correlation | | |
| Top 10 positively co-expressed genes |
| DDX39 | 0.95 | 0.89 | | |
| SNRPA | 0.94 | 0.88 | | |
| MAD2L2 | 0.94 | 0.94 | | |
| RCC1 | 0.94 | 0.85 | | |
| CDK4 | 0.93 | 0.86 | | |
| KIF22 | 0.92 | 0.91 | | |
| LRRC42 | 0.92 | 0.89 | | |
| WDR34 | 0.92 | 0.91 | | |
| FANCG | 0.92 | 0.90 | | |
| THOC4 | 0.92 | 0.92 | | |
Top 10 negatively co-expressed genes | | HLA-F | -0.66 | -0.76 | | |
| AF347015.27 | -0.64 | -0.84 | | |
| C5orf53 | -0.63 | -0.70 | | |
| AIFM3 | -0.63 | -0.73 | | |
| AF347015.33 | -0.63 | -0.85 | | |
| MT-CO2 | -0.62 | -0.82 | | |
| FBXO2 | -0.62 | -0.63 | | |
| ALDOC | -0.62 | -0.68 | | |
| TINAGL1 | -0.62 | -0.74 | | |
| AF347015.31 | -0.61 | -0.79 | | |
|
| Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0003677 | DNA binding | NAS | | 9592139 |10341103 |
| Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0007130 | synaptonemal complex assembly | NAS | Synap (GO term level: 11) | 10341103 |
| GO:0007049 | cell cycle | IEA | | - |
| GO:0007126 | meiosis | IEA | | - |
| GO:0007128 | meiotic prophase I | NAS | | 9592139 |
| GO:0051301 | cell division | IEA | | - |
| Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0000795 | synaptonemal complex | NAS | | 9592139 |10341103 |
| GO:0005634 | nucleus | NAS | | 10341103 |
| |