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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

Gene Ranking Integration

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: CDR2

Summary

GeneID

1039

Symbol

CDR2

Synonyms

CDR62|Yo

Description

cerebellar degeneration-related protein 2, 62kDa

Locus tag

Gene type

protein-coding

Map location

16p12.3

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_IIE

genome scan meta-analysis (European-ancestry samples)

Psr: 0.01775

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0003674

molecular_function

GO:0005515

protein binding

IPI

11988016

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005634

nucleus

NAS

GO:0005737

cytoplasm

IEA

Interactions

Shown by Network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
PKN1	DBK \| MGC46204 \| PAK1 \| PKN \| PKN-ALPHA \| PRK1 \| PRKCL1	protein kinase N1	-	HPRD,BioGRID	9637778

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-200bc/429	901	907	m8	hsa-miR-200b	UAAUACUGCCUGGUAAUGAUGAC
				hsa-miR-200c	UAAUACUGCCGGGUAAUGAUGG
				hsa-miR-429	UAAUACUGUCUGGUAAAACCGU
miR-223	562	568	1A	hsa-miR-223	UGUCAGUUUGUCAAAUACCCC
miR-376	1017	1023	1A	hsa-miR-376a	AUCAUAGAGGAAAAUCCACGU
miR-376	1017	1023	1A	hsa-miR-376b	AUCAUAGAGGAAAAUCCAUGUU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.